Non-Coding RNA Search

Ss1.1-Pig4-TMW8012E04.5

Sequence:


               
               CCTTAATCCATTAATCACAGCAGTATTTCTAGAGGCATCAAACAGTGCTTCCTACATTCA
GGATGCCTTTCAGCTACTTTTACCTGTGCTGGAGATCTCTCTTATTGAGAACAAGACTGA
GTTACCAGAGGCATAAGCTGCAGGTCCAGAGGCCTTTGTCAGAACATTGAAGAACAGAGA
AGATTCTACCCGATACTTAAGATGGCCAAGAAATGCCACTCTCTTCTGGGTACCTCTGCA
GAAGTGAGGAAGGAAGGTTATTTTAGTATTAAAAATCCAGGCAGTAGAGCAGGTGTAAAG
GAAGTTTGCTGCCTTCACTGCCTGGCTGAAGTATTCAGGTCCTCACACTGCTCTTCTCAG
TTGTTATAATTAATAACTTGAAAAAAAACTTCTATAGAAAGTTCAGAAATAAAGGCTCTA
GTTAAAGGTTAATGGGACACTCAGGCAGAAATATTGGTCTTTCTTTGACAGGGTATAAAA
CACTAAAAATTTTGTCATGGATATAATTTTGCAGTCCATGGATATAACTGGTTGTTAATC
AAAAGGAAAAATAATTTAGTATTCTGGAATTCACATGCTTGAACTATTAATGCCATTTTC
TTTCTCCTTTCTGTAGTAAAATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTTAATCCATTAATCACAGCAGTATTTCTAGAGGCATCAAACAGTGCTTCCTACATTCA
GGATGCCTTTCAGCTACTTTTACCTGTGCTGGAGATCTCTCTTATTGAGAACAAGACTGA
GTTACCAGAGGCATAAGCTGCAGGTCCAGAGGCCTTTGTCAGAACATTGAAGAACAGAGA
AGATTCTACCCGATACTTAAGATGGCCAAGAAATGCCACTCTCTTCTGGGTACCTCTGCA
GAAGTGAGGAAGGAAGGTTATTTTAGTATTAAAAATCCAGGCAGTAGAGCAGGTGTAAAG
GAAGTTTGCTGCCTTCACTGCCTGGCTGAAGTATTCAGGTCCTCACACTGCTCTTCTCAG
TTGTTATAATTAATAACTTGAAAAAAAACTTCTATAGAAAGTTCAGAAATAAAGGCTCTA
GTTAAAGGTTAATGGGACACTCAGGCAGAAATATTGGTCTTTCTTTGACAGGGTATAAAA
CACTAAAAATTTTGTCATGGATATAATTTTGCAGTCCATGGATATAACTGGTTGTTAATC
AAAAGGAAAAATAATTTAGTATTCTGGAATTCACATGCTTGAACTATTAATGCCATTTTC
TTTCTCCTTTCTGTAGTAAAATCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               24-556, gnl|bosTau2|chr7 (43934001-43933464)
               

               
               24-556, gnl|Hg17|chr5 (153352874-153352349)
               

               
               24-556, gnl|Mm7|chr11 (57565695-57565180)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               24-556, gnl|bosTau2|chr7 (43934001-43933464)
               

               
               24-556, gnl|Hg17|chr5 (153352874-153352349)
               

               
               24-556, gnl|Mm7|chr11 (57565695-57565180)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               ski (0.146735)
               

               
               eru (0.120048)
               

               
               cbl (0.114797)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)
               

               
               eru (0.120048)
               

               
               cbl (0.114797)

	24-556, gnl\|bosTau2\|chr7 (43934001-43933464)
	24-556, gnl\|Hg17\|chr5 (153352874-153352349)
	24-556, gnl\|Mm7\|chr11 (57565695-57565180)