Non-Coding RNA Search

Ss1.1-Pig4-TMW8012K10.3

Sequence:


               
               GGGGCAGGGTTTAAGTGGGAATTAACTCTGTTGAAGAAAGTGGGGTTTTACAGTCCTAGG
AATGAAAGCAGTGAGGTCCTCAAGTGGGGAATCCTATTGGAAACCAGAGCTGTAAGAAAA
TATGTCCTTAGAGTTAAAGTAGTCTGATGGCCTAGAGCAGGGCTCGTCACAGATTACTGG
GCAAGTGAATCATCTGGAATCGTGTTACGGTGCAGACTCAGATTCAGTGAGTCTGTGGCA
GGACCTGGGATTTGTGCCTCTAACGTGCTGCCATGTGAGGGCCATGCTGTTGACACTTGG
TCCATACTTTGAAGAGTGTGGTTTTAGATGACTGTAGGATGTGGGACAGAGGTCAGAAGA
ACTGTGTTCTTGTCCTGGCTGCTGCAACTCAGGCCAGTTGGGTCATCACTCTTTTATGTA
GCCTTGTATCTAAAATCAAGCTAGTGATAGTTTCCCTATTATATGTCTCACGAGGTAATT
TGGAACCTATGTTTAAGCAACGTGCATTTCAAAAAAGAAATACAAAAATCATGAGATGAT
AGAAAATAGGCAAGCCTTCAAATATAAAATATTCTAGAAAGAAAAATTTAAAATGGCGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGCAGGGTTTAAGTGGGAATTAACTCTGTTGAAGAAAGTGGGGTTTTACAGTCCTAGG
AATGAAAGCAGTGAGGTCCTCAAGTGGGGAATCCTATTGGAAACCAGAGCTGTAAGAAAA
TATGTCCTTAGAGTTAAAGTAGTCTGATGGCCTAGAGCAGGGCTCGTCACAGATTACTGG
GCAAGTGAATCATCTGGAATCGTGTTACGGTGCAGACTCAGATTCAGTGAGTCTGTGGCA
GGACCTGGGATTTGTGCCTCTAACGTGCTGCCATGTGAGGGCCATGCTGTTGACACTTGG
TCCATACTTTGAAGAGTGTGGTTTTAGATGACTGTAGGATGTGGGACAGAGGTCAGAAGA
ACTGTGTTCTTGTCCTGGCTGCTGCAACTCAGGCCAGTTGGGTCATCACTCTTTTATGTA
GCCTTGTATCTAAAATCAAGCTAGTGATAGTTTCCCTATTATATGTCTCACGAGGTAATT
TGGAACCTATGTTTAAGCAACGTGCATTTCAAAAAAGAAATACAAAAATCATGAGATGAT
AGAAAATAGGCAAGCCTTCAAATATAAAATATTCTAGAAAGAAAAATTTAAAATGGCGAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-597, gnl|bosTau2|chr16 (26598194-26598786)
               

               
               1-597, gnl|Hg17|chr1 (167431182-167431769)
               

               
               1-597, gnl|Mm7|chr1 (163214948-163214347)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-597, gnl|bosTau2|chr16 (26598194-26598786)
               

               
               1-597, gnl|Hg17|chr1 (167431182-167431769)
               

               
               1-597, gnl|Mm7|chr1 (163214948-163214347)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-597, gnl\|bosTau2\|chr16 (26598194-26598786)
	1-597, gnl\|Hg17\|chr1 (167431182-167431769)
	1-597, gnl\|Mm7\|chr1 (163214948-163214347)