Ss1.1-Pig4-TMW8012L08.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTGAGGGGTTCCAGCTCCGTTCCATCCCAGTAAAGGGGGCTGAAGATGATGAACTGGAA GAAGAGGCTGACTGGATCTACAGGAATGCCTTTGCCACACCAACCATTTCTCTGCAGGAA AGCTGTGATTACCTAGACCGAGGGCAGCCAACCAGCAGCTTCAGTCGAAAAGGGCCCAGC ACAATTCAGAAGATTAAAGAAGCCCTGGGCTTCATGCGAAATCAGCATTTTGAGGTGCCT TTTATTGCCTTCTACCGGAAGGAGTATGTGGAGCCCGAATTGCATATCAATGACCTGTGG AGGGTGTGGCAGTGGGATGAAAAGTGGACCCAGCTGAGGATTCGTAAGGAGAACCTGACA CGGCTGTTTGAGAAGATGCAAGCTTATCAGTATGAGCAAATCTCTGCTGATCCTGATAAG CCCCTTGCTGATGGCATCCGGGCTCTGGACACCACTGACATGGAGAGGCTCAAGGATGTA CAGTCAATGGATGAACTGAAAGATGTCTACAATCATTTTCTGCTTTATTATGGTCGTGAC ATCCCCAAGATGCAGAATGCCGCCAAGGCCAGCCGCAAGAAGCTAAAGCGTGTTAGGGAA GAGGGAGATGAGGAAGGTGACGGTGAGGAGGCAGAAGATGAGGAGCAGAGGGGACCAGAG CTCAAGCAGGCTTCCCGCCGAGATATGTACACCATCTGCCAGAGCGCTGGGCTAGATGGC CTAGCCAAAAAGTTTGGGCTTACTCCTGAGCAGTTTGGGGAAAACCTCCGGGATAGCTAC CAGCGGCATGAGACAGAACAGTTTCCTGCAGAGCCTTTGGAGCTGGCCAAGGATTATGTT TGTAGTCAGTTCCCTACACCTGAAGCTGTGCTGGAAGGTGCCCGCTACATGGTAGCCCTG CAGATTGCCCGGGAGCCCCTTGTCCGGCAGGTGCTGAGGCAGACTTTCCAGGAGAGAGCC AAGCTCAATATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTGAGGGGTTCCAGCTCCGTTCCATCCCAGTAAAGGGGGCTGAAGATGATGAACTGGAA GAAGAGGCTGACTGGATCTACAGGAATGCCTTTGCCACACCAACCATTTCTCTGCAGGAA AGCTGTGATTACCTAGACCGAGGGCAGCCAACCAGCAGCTTCAGTCGAAAAGGGCCCAGC ACAATTCAGAAGATTAAAGAAGCCCTGGGCTTCATGCGAAATCAGCATTTTGAGGTGCCT TTTATTGCCTTCTACCGGAAGGAGTATGTGGAGCCCGAATTGCATATCAATGACCTGTGG AGGGTGTGGCAGTGGGATGAAAAGTGGACCCAGCTGAGGATTCGTAAGGAGAACCTGACA CGGCTGTTTGAGAAGATGCAAGCTTATCAGTATGAGCAAATCTCTGCTGATCCTGATAAG CCCCTTGCTGATGGCATCCGGGCTCTGGACACCACTGACATGGAGAGGCTCAAGGATGTA CAGTCAATGGATGAACTGAAAGATGTCTACAATCATTTTCTGCTTTATTATGGTCGTGAC ATCCCCAAGATGCAGAATGCCGCCAAGGCCAGCCGCAAGAAGCTAAAGCGTGTTAGGGAA GAGGGAGATGAGGAAGGTGACGGTGAGGAGGCAGAAGATGAGGAGCAGAGGGGACCAGAG CTCAAGCAGGCTTCCCGCCGAGATATGTACACCATCTGCCAGAGCGCTGGGCTAGATGGC CTAGCCAAAAAGTTTGGGCTTACTCCTGAGCAGTTTGGGGAAAACCTCCGGGATAGCTAC CAGCGGCATGAGACAGAACAGTTTCCTGCAGAGCCTTTGGAGCTGGCCAAGGATTATGTT TGTAGTCAGTTCCCTACACCTGAAGCTGTGCTGGAAGGTGCCCGCTACATGGTAGCCCTG CAGATTGCCCGGGAGCCCCTTGTCCGGCAGGTGCTGAGGCAGACTTTCCAGGAGAGAGCC AAGCTCAATATA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 112-236, gnl|bosTau2|chr19 (13652269-13652393) | |
| 112-236, gnl|canFam2|chr9 (46201202-46201357) | |
| 112-236, gnl|danRer3|chr21 (23654555-23654411) | |
| 112-236, gnl|echTel1|scaffold_317923 (119362-119512) | |
| 112-236, gnl|fr1|chrUn (169642311-169642451) | |
| 112-236, gnl|hg17|chr17 (24029192-24029344) | |
| 112-236, gnl|Hg17|chr17 (24029215-24029339) | |
| 112-236, gnl|loxAfr1|scaffold_192542 (278-438) | |
| 112-236, gnl|mm7|chr11 (78311126-78310967) | |
| 112-236, gnl|Mm7|chr11 (78311094-78310970) | |
| 112-236, gnl|monDom2|scaffold_44 (14623073-14623231) | |
| 112-236, gnl|oryCun1|scaffold_211086 (85423-85261) | |
| 112-236, gnl|panTro1|chr19 (27370521-27370673) | |
| 112-236, gnl|rheMac2|chr16 (23882905-23883057) | |
| 112-236, gnl|rn3|chr10 (64417936-64418094) | |
| 112-236, gnl|tetNig1|chr7 (7293462-7293322) | |
| 112-236, gnl|xenTro1|scaffold_50 (1269209-1269055) | |
| 466-620, gnl|bosTau2|chr19 (13653818-13653972) | |
| 466-620, gnl|canFam2|chr9 (46203044-46203243) | |
| 466-620, gnl|danRer3|chr21 (23653948-23653779) | |
| 466-620, gnl|echTel1|scaffold_317923 (120568-120751) | |
| 466-620, gnl|fr1|chrUn (169642998-169643187) | |
| 466-620, gnl|galGal2|chrUn (16046674-16046859) | |
| 466-620, gnl|hg17|chr17 (24032375-24032590) | |
| 466-620, gnl|Hg17|chr17 (24032399-24032768) | |
| 466-620, gnl|loxAfr1|scaffold_33503 (18584-18377) | |
| 466-620, gnl|mm7|chr11 (78308640-78308451) | |
| 466-620, gnl|Mm7|chr11 (78308616-78308462) | |
| 466-620, gnl|monDom2|scaffold_44 (14624078-14624284) | |
| 466-620, gnl|oryCun1|scaffold_195515 (42428-42264) | |
| 466-620, gnl|panTro1|chr19 (27373816-27374031) | |
| 466-620, gnl|rheMac2|chr16 (23886131-23886346) | |
| 466-620, gnl|rn3|chr10 (64420600-64420798) | |
| 466-620, gnl|xenTro1|scaffold_50 (1265667-1265499) | |
| 713-845, gnl|bosTau2|chr19 (13654627-13654759) | |
| 713-845, gnl|Hg17|chr17 (24033869-24034001) | |
| 713-845, gnl|Mm7|chr11 (78307887-78307755) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 112-236, gnl|bosTau2|chr19 (13652269-13652393) | |
| 112-236, gnl|canFam2|chr9 (46201202-46201357) | |
| 112-236, gnl|danRer3|chr21 (23654555-23654411) | |
| 112-236, gnl|echTel1|scaffold_317923 (119362-119512) | |
| 112-236, gnl|fr1|chrUn (169642311-169642451) | |
| 112-236, gnl|hg17|chr17 (24029192-24029344) | |
| 112-236, gnl|Hg17|chr17 (24029215-24029339) | |
| 112-236, gnl|loxAfr1|scaffold_192542 (278-438) | |
| 112-236, gnl|mm7|chr11 (78311126-78310967) | |
| 112-236, gnl|Mm7|chr11 (78311094-78310970) | |
| 112-236, gnl|monDom2|scaffold_44 (14623073-14623231) | |
| 112-236, gnl|oryCun1|scaffold_211086 (85423-85261) | |
| 112-236, gnl|panTro1|chr19 (27370521-27370673) | |
| 112-236, gnl|rheMac2|chr16 (23882905-23883057) | |
| 112-236, gnl|rn3|chr10 (64417936-64418094) | |
| 112-236, gnl|tetNig1|chr7 (7293462-7293322) | |
| 112-236, gnl|xenTro1|scaffold_50 (1269209-1269055) | |
| 466-620, gnl|bosTau2|chr19 (13653818-13653972) | |
| 466-620, gnl|canFam2|chr9 (46203044-46203243) | |
| 466-620, gnl|danRer3|chr21 (23653948-23653779) | |
| 466-620, gnl|echTel1|scaffold_317923 (120568-120751) | |
| 466-620, gnl|fr1|chrUn (169642998-169643187) | |
| 466-620, gnl|galGal2|chrUn (16046674-16046859) | |
| 466-620, gnl|hg17|chr17 (24032375-24032590) | |
| 466-620, gnl|Hg17|chr17 (24032399-24032768) | |
| 466-620, gnl|loxAfr1|scaffold_33503 (18584-18377) | |
| 466-620, gnl|mm7|chr11 (78308640-78308451) | |
| 466-620, gnl|Mm7|chr11 (78308616-78308462) | |
| 466-620, gnl|monDom2|scaffold_44 (14624078-14624284) | |
| 466-620, gnl|oryCun1|scaffold_195515 (42428-42264) | |
| 466-620, gnl|panTro1|chr19 (27373816-27374031) | |
| 466-620, gnl|rheMac2|chr16 (23886131-23886346) | |
| 466-620, gnl|rn3|chr10 (64420600-64420798) | |
| 466-620, gnl|xenTro1|scaffold_50 (1265667-1265499) | |
| 713-845, gnl|bosTau2|chr19 (13654627-13654759) | |
| 713-845, gnl|Hg17|chr17 (24033869-24034001) | |
| 713-845, gnl|Mm7|chr11 (78307887-78307755) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) |