Non-Coding RNA Search

Ss1.1-Pig4-TMW8012L09.5

Sequence:


               
               AAAGAAGAGATACAACTGCTAGTATTTTGAAAGGGAGTCATCTTCTCAAAAGCAGCCTTC
ATTTGTCACTAGAAATCTTTACTACTCATTACAAGTTAATTTTCTACTCATAACCTCTCA
TTGTGTAGAAGGGTTTACTTCTAGTGTATACTTTATAACAAAGGTGTCATTTTATAGTTG
GCCTTGGCAGAATTATATGAAGACGAAGTGAAATGCAAAGCTTCCAAACCCGATAGACCT
AAAGCTACAGGCTTTAAAAGCCCGCGAACACCACCTCAAAGGTTCTATTCAAGTGAACAT
GGATACAGCGGATTACATATAGTTCGCCCTTCAACTGGGAAAATTGTGAATGAACTCTTC
AAAGAGGCAAGAGAACATGGGGCCGTCCCTCTGAATGAAGCCACAAGAGCTTCAGGTGAT
GACAAATCTAAGTCTTTTACAGGTGGAGGATATAGATTGGGTAATTCCTTTTGTAAGCGA
TCTGAATACATCTATGGAGAAAGTCAATTGCAAGATGTTCAGATTTTGCTGAAACTCTGG
AGCAATGGTTTCAGTTTAGATGATGGAGAATTGAGACCTTACAGTGACCCAACAAATGCC
CAGTTTCTGGAGTCTGTTAAGAGAGGAGAGATTCCCCTGGAGCTTCAGCGGCTGGTCCGT
GGCGGCCACGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGAAGAGATACAACTGCTAGTATTTTGAAAGGGAGTCATCTTCTCAAAAGCAGCCTTC
ATTTGTCACTAGAAATCTTTACTACTCATTACAAGTTAATTTTCTACTCATAACCTCTCA
TTGTGTAGAAGGGTTTACTTCTAGTGTATACTTTATAACAAAGGTGTCATTTTATAGTTG
GCCTTGGCAGAATTATATGAAGACGAAGTGAAATGCAAAGCTTCCAAACCCGATAGACCT
AAAGCTACAGGCTTTAAAAGCCCGCGAACACCACCTCAAAGGTTCTATTCAAGTGAACAT
GGATACAGCGGATTACATATAGTTCGCCCTTCAACTGGGAAAATTGTGAATGAACTCTTC
AAAGAGGCAAGAGAACATGGGGCCGTCCCTCTGAATGAAGCCACAAGAGCTTCAGGTGAT
GACAAATCTAAGTCTTTTACAGGTGGAGGATATAGATTGGGTAATTCCTTTTGTAAGCGA
TCTGAATACATCTATGGAGAAAGTCAATTGCAAGATGTTCAGATTTTGCTGAAACTCTGG
AGCAATGGTTTCAGTTTAGATGATGGAGAATTGAGACCTTACAGTGACCCAACAAATGCC
CAGTTTCTGGAGTCTGTTAAGAGAGGAGAGATTCCCCTGGAGCTTCAGCGGCTGGTCCGT
GGCGGCCACGTG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               Q5ZLK2_CHICK

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               Q5ZLK2_CHICK

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               279-515, gnl|bosTau2|chr2 (64316453-64316685)
               

               
               279-515, gnl|Mm7|chr4 (6129436-6131006)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               279-515, gnl|bosTau2|chr2 (64316453-64316685)
               

               
               279-515, gnl|Mm7|chr4 (6129436-6131006)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ret (0.128733)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	279-515, gnl\|bosTau2\|chr2 (64316453-64316685)
	279-515, gnl\|Mm7\|chr4 (6129436-6131006)