Ss1.1-Pig4-TMW8012M09.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGCCGCGGCTCGAGCTCTTATCTCCAATGCGCAAGATCTTGCACAAGAGGTACAAACTG TTTTGAAGCCAGTCCACCAGAAGGAAGGACAAGAATTAACTGCTTTGCTGAATGCTCCGC ATATTCAGGCACTTTTACTGGCCCATGATAAGGTTGCTGAGCAGGAAATGCAGCTAGAGC CCATTGCAGATGAGAGAGTTTATGAAAGCATTGGCCAGTATGGAGGAGAAACTGTAAAAA TAGTTCGTATAGAAAAGGCTCGAGATATTCCGTTGGGTGCTACAGTTCGTAATGAAATGG ATTCTGTCATCATTAGTCGGATAGTTAAAGGAGGTGCTGCAGAGAAAAGTGGCCTGTTGC ATGAAGGAGATGAAGTTCTAGAGATTAATGGCATTGAAATTCGGGGGAAAGACGTCAATG AGGTTTTTGACTTACTGTCTGATATGCATGGTACTTTGACATTTGTTCTGATTCCAAGTC AACAGATCAAGCCTCCTCCTGCGAAGGAAACAGTAATCCATGTAAAAGCTCATTTTGACT ATGACCCCTCAGATGACCCCTATGTTCCCTGTCGAGAGTTAGGTCTATCTTTTCAAAAGG GGGATATCCTTCATGTGATCAGTCAGGAAGATCCAAATTGGTGGCAAGCCTACAGGGAAG GGGACGAAGATAATCAGCCTCTAGCTGGGCTGGTTCCAGGGAAGAGCTTTCAGCAGCAAA GGGAAGCCATGAAGCAAACCATAGAGGAAGATAAGGAACCAGAAAAATCAGGAAAACTGT GGTGTGCAAAAAAGAATAAAAAGAAGAGGAAAAAGGTTTTATATAATGCCAATAAAAATG ATGATTATGACAATGAAGAGATCTTAACTTATGAAGAGATGTCACTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGCCGCGGCTCGAGCTCTTATCTCCAATGCGCAAGATCTTGCACAAGAGGTACAAACTG TTTTGAAGCCAGTCCACCAGAAGGAAGGACAAGAATTAACTGCTTTGCTGAATGCTCCGC ATATTCAGGCACTTTTACTGGCCCATGATAAGGTTGCTGAGCAGGAAATGCAGCTAGAGC CCATTGCAGATGAGAGAGTTTATGAAAGCATTGGCCAGTATGGAGGAGAAACTGTAAAAA TAGTTCGTATAGAAAAGGCTCGAGATATTCCGTTGGGTGCTACAGTTCGTAATGAAATGG ATTCTGTCATCATTAGTCGGATAGTTAAAGGAGGTGCTGCAGAGAAAAGTGGCCTGTTGC ATGAAGGAGATGAAGTTCTAGAGATTAATGGCATTGAAATTCGGGGGAAAGACGTCAATG AGGTTTTTGACTTACTGTCTGATATGCATGGTACTTTGACATTTGTTCTGATTCCAAGTC AACAGATCAAGCCTCCTCCTGCGAAGGAAACAGTAATCCATGTAAAAGCTCATTTTGACT ATGACCCCTCAGATGACCCCTATGTTCCCTGTCGAGAGTTAGGTCTATCTTTTCAAAAGG GGGATATCCTTCATGTGATCAGTCAGGAAGATCCAAATTGGTGGCAAGCCTACAGGGAAG GGGACGAAGATAATCAGCCTCTAGCTGGGCTGGTTCCAGGGAAGAGCTTTCAGCAGCAAA GGGAAGCCATGAAGCAAACCATAGAGGAAGATAAGGAACCAGAAAAATCAGGAAAACTGT GGTGTGCAAAAAAGAATAAAAAGAAGAGGAAAAAGGTTTTATATAATGCCAATAAAAATG ATGATTATGACAATGAAGAGATCTTAACTTATGAAGAGATGTCACTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 126-276, gnl|bosTau2|chr10 (54317078-54316928) | |
| 126-276, gnl|canFam2|chr8 (44338357-44338499) | |
| 126-276, gnl|danRer3|chr17 (23555990-23556115) | |
| 126-276, gnl|echTel1|scaffold_208776 (11079-11223) | |
| 126-276, gnl|fr1|chrUn (228423305-228423210) | |
| 126-276, gnl|galGal2|chr5 (25897921-25897754) | |
| 126-276, gnl|hg17|chr14 (66838420-66838562) | |
| 126-276, gnl|Hg17|chr14 (66838439-66838589) | |
| 126-276, gnl|loxAfr1|scaffold_36674 (9066-8926) | |
| 126-276, gnl|mm7|chr12 (76776275-76776417) | |
| 126-276, gnl|Mm7|chr12 (76776294-76776444) | |
| 126-276, gnl|monDom2|scaffold_8 (82530935-82531062) | |
| 126-276, gnl|oryCun1|scaffold_152809 (3343-3485) | |
| 126-276, gnl|panTro1|chr15 (66453624-66453766) | |
| 126-276, gnl|rheMac2|chr7 (130410235-130410377) | |
| 126-276, gnl|rn3|chr6 (101443127-101443269) | |
| 126-276, gnl|tetNig1|chr14 (2305979-2305884) | |
| 126-276, gnl|xenTro1|scaffold_7 (749822-749678) | |
| 516-706, gnl|bosTau2|chr10 (54307687-54307497) | |
| 516-706, gnl|canFam2|chr8 (44348624-44348841) | |
| 516-706, gnl|danRer3|chr17 (23559270-23559464) | |
| 516-706, gnl|dasNov1|scaffold_4622 (46169-46000) | |
| 516-706, gnl|echTel1|scaffold_320162 (78886-78667) | |
| 516-706, gnl|fr1|chrUn (228422265-228422043) | |
| 516-706, gnl|galGal2|chr5 (25893282-25893068) | |
| 516-706, gnl|hg17|chr14 (66848990-66849211) | |
| 516-706, gnl|Hg17|chr14 (66848997-66849187) | |
| 516-706, gnl|loxAfr1|scaffold_106124 (4751-4972) | |
| 516-706, gnl|mm7|chr12 (76783354-76783572) | |
| 516-706, gnl|Mm7|chr12 (76783361-76783551) | |
| 516-706, gnl|monDom2|scaffold_8 (82551738-82551959) | |
| 516-706, gnl|oryCun1|scaffold_133776 (25606-25385) | |
| 516-706, gnl|panTro1|chr15 (66464196-66464417) | |
| 516-706, gnl|rheMac2|chr7 (130421878-130422099) | |
| 516-706, gnl|rn3|chr6 (101450304-101450522) | |
| 516-706, gnl|tetNig1|chr14 (2305167-2304955) | |
| 516-706, gnl|xenTro1|scaffold_7 (747486-747284) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 126-276, gnl|bosTau2|chr10 (54317078-54316928) | |
| 126-276, gnl|canFam2|chr8 (44338357-44338499) | |
| 126-276, gnl|danRer3|chr17 (23555990-23556115) | |
| 126-276, gnl|echTel1|scaffold_208776 (11079-11223) | |
| 126-276, gnl|fr1|chrUn (228423305-228423210) | |
| 126-276, gnl|galGal2|chr5 (25897921-25897754) | |
| 126-276, gnl|hg17|chr14 (66838420-66838562) | |
| 126-276, gnl|Hg17|chr14 (66838439-66838589) | |
| 126-276, gnl|loxAfr1|scaffold_36674 (9066-8926) | |
| 126-276, gnl|mm7|chr12 (76776275-76776417) | |
| 126-276, gnl|Mm7|chr12 (76776294-76776444) | |
| 126-276, gnl|monDom2|scaffold_8 (82530935-82531062) | |
| 126-276, gnl|oryCun1|scaffold_152809 (3343-3485) | |
| 126-276, gnl|panTro1|chr15 (66453624-66453766) | |
| 126-276, gnl|rheMac2|chr7 (130410235-130410377) | |
| 126-276, gnl|rn3|chr6 (101443127-101443269) | |
| 126-276, gnl|tetNig1|chr14 (2305979-2305884) | |
| 126-276, gnl|xenTro1|scaffold_7 (749822-749678) | |
| 516-706, gnl|bosTau2|chr10 (54307687-54307497) | |
| 516-706, gnl|canFam2|chr8 (44348624-44348841) | |
| 516-706, gnl|danRer3|chr17 (23559270-23559464) | |
| 516-706, gnl|dasNov1|scaffold_4622 (46169-46000) | |
| 516-706, gnl|echTel1|scaffold_320162 (78886-78667) | |
| 516-706, gnl|fr1|chrUn (228422265-228422043) | |
| 516-706, gnl|galGal2|chr5 (25893282-25893068) | |
| 516-706, gnl|hg17|chr14 (66848990-66849211) | |
| 516-706, gnl|Hg17|chr14 (66848997-66849187) | |
| 516-706, gnl|loxAfr1|scaffold_106124 (4751-4972) | |
| 516-706, gnl|mm7|chr12 (76783354-76783572) | |
| 516-706, gnl|Mm7|chr12 (76783361-76783551) | |
| 516-706, gnl|monDom2|scaffold_8 (82551738-82551959) | |
| 516-706, gnl|oryCun1|scaffold_133776 (25606-25385) | |
| 516-706, gnl|panTro1|chr15 (66464196-66464417) | |
| 516-706, gnl|rheMac2|chr7 (130421878-130422099) | |
| 516-706, gnl|rn3|chr6 (101450304-101450522) | |
| 516-706, gnl|tetNig1|chr14 (2305167-2304955) | |
| 516-706, gnl|xenTro1|scaffold_7 (747486-747284) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |