Ss1.1-Pig4-TMW8012O04.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGACCTATCATGTTCGAAGGCATACGGGAGAAAAGCCTTATGTGTGTGATACCTGTGGAA AGGCATTTGCTGTCTCTAGTTCTCTCATCACTCATTCTCGAAAACATACAGGTGAAAAAC TTTAGTTTATAAACATTGATATTTTTTATCTTAACAGCTTGAGAAATACTGAGACTTTTT AAACTTCTTTTTCAGGAGAAAGACCATTTATATGTGAACTATGTGGAAATTCTTACACAG ATATTAAAAATTTAAAGAAGCACAAAACAAAAGTCCATTCTGGTACAGATAAAATTCTAG ATTCCAGTATAGAGGATCATCCCTTGAGTGAAAAAGAGTCCATACAAAAAAGTCCTTTAT CAGAAACTTTGGATGTGAAGCCTTCTGATATGGCTTTACCACTGACTCTTCCACTTGGGA CTGAGGACCACCACATGCTTCTGCCTGTCACAGATAATCAGTCTCCTACATCAGATGCAT TGTTGAGATCAACTGTGAATGGGTATTCAGAACCACAACTGATTTTTTTACAGCAGTTAT ACTGACTTTGTGAGGAATATGGAATTGCTAAGGTGTCTCTGGTAGTAAACATAAACATCT CTGGTAAGGTGCATATATTCATATTAAATTAACCATTTATTTGGGTTGTGGCCATTATTT TTCACTGACTAAAGTAAAAGCACCTGATGCTGCATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGACCTATCATGTTCGAAGGCATACGGGAGAAAAGCCTTATGTGTGTGATACCTGTGGAA AGGCATTTGCTGTCTCTAGTTCTCTCATCACTCATTCTCGAAAACATACAGGTGAAAAAC TTTAGTTTATAAACATTGATATTTTTTATCTTAACAGCTTGAGAAATACTGAGACTTTTT AAACTTCTTTTTCAGGAGAAAGACCATTTATATGTGAACTATGTGGAAATTCTTACACAG ATATTAAAAATTTAAAGAAGCACAAAACAAAAGTCCATTCTGGTACAGATAAAATTCTAG ATTCCAGTATAGAGGATCATCCCTTGAGTGAAAAAGAGTCCATACAAAAAAGTCCTTTAT CAGAAACTTTGGATGTGAAGCCTTCTGATATGGCTTTACCACTGACTCTTCCACTTGGGA CTGAGGACCACCACATGCTTCTGCCTGTCACAGATAATCAGTCTCCTACATCAGATGCAT TGTTGAGATCAACTGTGAATGGGTATTCAGAACCACAACTGATTTTTTTACAGCAGTTAT ACTGACTTTGTGAGGAATATGGAATTGCTAAGGTGTCTCTGGTAGTAAACATAAACATCT CTGGTAAGGTGCATATATTCATATTAAATTAACCATTTATTTGGGTTGTGGCCATTATTT TTCACTGACTAAAGTAAAAGCACCTGATGCTGCATC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-118, gnl|bosTau2|chr1 (63239569-63239452) | |
| 1-118, gnl|canFam2|chr34 (37393660-37393878) | |
| 1-118, gnl|danRer3|chr24 (25275005-25275211) | |
| 1-118, gnl|dasNov1|scaffold_11987 (44295-44514) | |
| 1-118, gnl|echTel1|scaffold_210745 (6267-6458) | |
| 1-118, gnl|fr1|chrUn (157257035-157257236) | |
| 1-118, gnl|galGal2|chr9 (19430661-19430441) | |
| 1-118, gnl|hg17|chr3 (170982940-170983155) | |
| 1-118, gnl|Hg17|chr3 (170983023-170983140) | |
| 1-118, gnl|loxAfr1|scaffold_32088 (14113-14314) | |
| 1-118, gnl|mm7|chr3 (30423390-30423607) | |
| 1-118, gnl|Mm7|chr3 (30423475-30423592) | |
| 1-118, gnl|monDom2|scaffold_52 (2258428-2258231) | |
| 1-118, gnl|oryCun1|scaffold_210783 (35186-35403) | |
| 1-118, gnl|panTro1|chr2 (174471439-174471654) | |
| 1-118, gnl|rheMac2|chr2 (117235184-117234969) | |
| 1-118, gnl|rn3|chr2 (117150073-117149856) | |
| 1-118, gnl|tetNig1|chrUn_random (52967525-52967335) | |
| 1-118, gnl|xenTro1|scaffold_3 (2741999-2741808) | |
| 278-696, gnl|bosTau2|chr1 (63235914-63235497) | |
| 278-696, gnl|Hg17|chr3 (170986901-170987312) | |
| 278-696, gnl|Mm7|chr3 (30428509-30428928) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-118, gnl|bosTau2|chr1 (63239569-63239452) | |
| 1-118, gnl|canFam2|chr34 (37393660-37393878) | |
| 1-118, gnl|danRer3|chr24 (25275005-25275211) | |
| 1-118, gnl|dasNov1|scaffold_11987 (44295-44514) | |
| 1-118, gnl|echTel1|scaffold_210745 (6267-6458) | |
| 1-118, gnl|fr1|chrUn (157257035-157257236) | |
| 1-118, gnl|galGal2|chr9 (19430661-19430441) | |
| 1-118, gnl|hg17|chr3 (170982940-170983155) | |
| 1-118, gnl|Hg17|chr3 (170983023-170983140) | |
| 1-118, gnl|loxAfr1|scaffold_32088 (14113-14314) | |
| 1-118, gnl|mm7|chr3 (30423390-30423607) | |
| 1-118, gnl|Mm7|chr3 (30423475-30423592) | |
| 1-118, gnl|monDom2|scaffold_52 (2258428-2258231) | |
| 1-118, gnl|oryCun1|scaffold_210783 (35186-35403) | |
| 1-118, gnl|panTro1|chr2 (174471439-174471654) | |
| 1-118, gnl|rheMac2|chr2 (117235184-117234969) | |
| 1-118, gnl|rn3|chr2 (117150073-117149856) | |
| 1-118, gnl|tetNig1|chrUn_random (52967525-52967335) | |
| 1-118, gnl|xenTro1|scaffold_3 (2741999-2741808) | |
| 278-696, gnl|bosTau2|chr1 (63235914-63235497) | |
| 278-696, gnl|Hg17|chr3 (170986901-170987312) | |
| 278-696, gnl|Mm7|chr3 (30428509-30428928) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| clu (0.239292) | |
| fco (0.157208) | |
| lin (0.145603) | |
| ova (0.129132) | |
| jca (0.11396) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.239292) | |
| fco (0.157208) | |
| lin (0.145603) | |
| ova (0.129132) | |
| jca (0.11396) |