Ss1.1-Pig4-TMW8013K01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGACCCCCAGTCCCGAGATGCTCGCCAGCAGCGTTTCGCCCACTTCACGGAGCTGGCCA TCATCTCAGTTCAGGAGATCGTGGACTTCGCCAAGCAGGTGCCTGGCTTCCTGCAGCTGG GTCGTGAGGACCAGATCGCCCTCCTGAAGGCATCCACCATTGAGATCATGCTGCTGGAGA CGGCCAGACGCTACAACCACGAGACAGAGTGCATCACTTTCCTGAAAGACTTCACCTACA GCAAGGATGACTTCCACCGCGCGGGCCTGCAGGTGGAGTTCATCAACCCCATCTTCGAGT TCTCGCGGGCCATGCGGCGCCTGGGCCTGGACGACGCCGAGTACGCCCTGCTCATCGCCA TCAACATCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCCAGCCGGGTGGAGGCTCTGC AGCAGCCCTATGTGGACGCGCTGCTTTCCTACACCCGCATCAAGAGGCCGCAGGACCAGC TGCGTTTCCCGCGAATGCTGATGAAGCTCGTAAGCCTGCGCACGCTCAGCTCCGTGCACT CCGAGCAGGTCTTCGCCCTGCGGCTGCAGGACAAGAAGCTGCCGCCTTTGCTGTCCGAGA TCTGGGACGTCCACGAATGAGGGGCTGCCCACCCCGCCCCCCCACCCTCCAGTGAATGGA CACCAGGGTGGGGAAAGGGCGGCCGGGCCTGGGGTCCGCCTTGTGGCTTGAAGCAGCGCT CAGGATGAGCCCCAGTCAGGGTCCAGGAGCCTCCCTCCTACCCACCGAGTCTTCCTGAGA AGGGGCAGATAGTCATCGATCGCCCACCTCTGACCTTCCCAGCGCTCCTGCTGCCCTCCT GCCCAGCTTACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGACCCCCAGTCCCGAGATGCTCGCCAGCAGCGTTTCGCCCACTTCACGGAGCTGGCCA TCATCTCAGTTCAGGAGATCGTGGACTTCGCCAAGCAGGTGCCTGGCTTCCTGCAGCTGG GTCGTGAGGACCAGATCGCCCTCCTGAAGGCATCCACCATTGAGATCATGCTGCTGGAGA CGGCCAGACGCTACAACCACGAGACAGAGTGCATCACTTTCCTGAAAGACTTCACCTACA GCAAGGATGACTTCCACCGCGCGGGCCTGCAGGTGGAGTTCATCAACCCCATCTTCGAGT TCTCGCGGGCCATGCGGCGCCTGGGCCTGGACGACGCCGAGTACGCCCTGCTCATCGCCA TCAACATCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCCAGCCGGGTGGAGGCTCTGC AGCAGCCCTATGTGGACGCGCTGCTTTCCTACACCCGCATCAAGAGGCCGCAGGACCAGC TGCGTTTCCCGCGAATGCTGATGAAGCTCGTAAGCCTGCGCACGCTCAGCTCCGTGCACT CCGAGCAGGTCTTCGCCCTGCGGCTGCAGGACAAGAAGCTGCCGCCTTTGCTGTCCGAGA TCTGGGACGTCCACGAATGAGGGGCTGCCCACCCCGCCCCCCCACCCTCCAGTGAATGGA CACCAGGGTGGGGAAAGGGCGGCCGGGCCTGGGGTCCGCCTTGTGGCTTGAAGCAGCGCT CAGGATGAGCCCCAGTCAGGGTCCAGGAGCCTCCCTCCTACCCACCGAGTCTTCCTGAGA AGGGGCAGATAGTCATCGATCGCCCACCTCTGACCTTCCCAGCGCTCCTGCTGCCCTCCT GCCCAGCTTACA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 1-164, gnl|bosTau2|chr15 (49040618-49040455) | |
| 1-164, gnl|Hg17|chr11 (47239690-47239853) | |
| 1-164, gnl|Mm7|chr2 (91041341-91041178) | |
| 251-376, gnl|bosTau2|chr15 (49037573-49037450) | |
| 251-376, gnl|Hg17|chr11 (47246028-47246151) | |
| 251-376, gnl|Mm7|chr2 (91035783-91035660) | |
| 470-852, gnl|bosTau2|chr18 (49225879-49226288) | |
| 470-852, gnl|Hg17|chr19 (55577521-55577924) | |
| 470-852, gnl|Mm7|chr7 (40724657-40724275) | |
| 472-620, gnl|bosTau2|chr15 (49036944-49036796) | |
| 472-620, gnl|canFam2|chr18 (45367715-45367553) | |
| 472-620, gnl|danRer3|chr20 (25164632-25164472) | |
| 472-620, gnl|dasNov1|scaffold_3175 (20837-20994) | |
| 472-620, gnl|echTel1|scaffold_311186 (73819-73980) | |
| 472-620, gnl|fr1|chrUn (94935417-94935570) | |
| 472-620, gnl|galGal2|chr5 (20408498-20408338) | |
| 472-620, gnl|hg17|chr11 (47246675-47246835) | |
| 472-620, gnl|Hg17|chr11 (47246675-47246823) | |
| 472-620, gnl|loxAfr1|scaffold_14545 (28354-28514) | |
| 472-620, gnl|mm7|chr2 (91035202-91035045) | |
| 472-620, gnl|Mm7|chr2 (91035200-91035052) | |
| 472-620, gnl|monDom2|scaffold_33 (13140528-13140683) | |
| 472-620, gnl|oryCun1|scaffold_195123 (26664-26504) | |
| 472-620, gnl|panTro1|chr9 (47763188-47763348) | |
| 472-620, gnl|rheMac2|chr14 (24850520-24850360) | |
| 472-620, gnl|rn3|chr3 (75438975-75438818) | |
| 472-620, gnl|tetNig1|chr5 (11155595-11155745) | |
| 472-620, gnl|xenTro1|scaffold_98 (2366161-2366308) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-164, gnl|bosTau2|chr15 (49040618-49040455) | |
| 1-164, gnl|Hg17|chr11 (47239690-47239853) | |
| 1-164, gnl|Mm7|chr2 (91041341-91041178) | |
| 251-376, gnl|bosTau2|chr15 (49037573-49037450) | |
| 251-376, gnl|Hg17|chr11 (47246028-47246151) | |
| 251-376, gnl|Mm7|chr2 (91035783-91035660) | |
| 470-852, gnl|bosTau2|chr18 (49225879-49226288) | |
| 470-852, gnl|Hg17|chr19 (55577521-55577924) | |
| 470-852, gnl|Mm7|chr7 (40724657-40724275) | |
| 472-620, gnl|bosTau2|chr15 (49036944-49036796) | |
| 472-620, gnl|canFam2|chr18 (45367715-45367553) | |
| 472-620, gnl|danRer3|chr20 (25164632-25164472) | |
| 472-620, gnl|dasNov1|scaffold_3175 (20837-20994) | |
| 472-620, gnl|echTel1|scaffold_311186 (73819-73980) | |
| 472-620, gnl|fr1|chrUn (94935417-94935570) | |
| 472-620, gnl|galGal2|chr5 (20408498-20408338) | |
| 472-620, gnl|hg17|chr11 (47246675-47246835) | |
| 472-620, gnl|Hg17|chr11 (47246675-47246823) | |
| 472-620, gnl|loxAfr1|scaffold_14545 (28354-28514) | |
| 472-620, gnl|mm7|chr2 (91035202-91035045) | |
| 472-620, gnl|Mm7|chr2 (91035200-91035052) | |
| 472-620, gnl|monDom2|scaffold_33 (13140528-13140683) | |
| 472-620, gnl|oryCun1|scaffold_195123 (26664-26504) | |
| 472-620, gnl|panTro1|chr9 (47763188-47763348) | |
| 472-620, gnl|rheMac2|chr14 (24850520-24850360) | |
| 472-620, gnl|rn3|chr3 (75438975-75438818) | |
| 472-620, gnl|tetNig1|chr5 (11155595-11155745) | |
| 472-620, gnl|xenTro1|scaffold_98 (2366161-2366308) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nep (0.183925) | |
| hyp (0.142837) | |
| pla (0.133672) | |
| eep (0.122564) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| hyp (0.142837) | |
| pla (0.133672) | |
| eep (0.122564) |