Ss1.1-Pig4-TMW8013N11.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTAACCCCGCCCTTCCTCACAGCAGGGTCCTGGGGGGCTGTTGAGGCCAAGGAGCCAGAA GGATCTTCAGAGGATGAAGATACCTCTGGTAGGACAGCAAGTCCAGAGTTGGCCTCCAGC ACCCCAGAGTTCCTTCAGGCCAGGCGACTTCAGGTTCTTGAACCAGCCCTACTGCCTAGC ACTGCAGTCTTACCTTCAGAACCTGCACAGCCTCTGTTGGCCAGGCTTCCTCCCAGGCCC CGCATCGCTGGTCCCAGGCCCCGTCCAGATCCCTACAAGGCTGGACTGAACCACTATGCT AAACTCTTTAGCTTTTATGCTAAGATGCCCATGGAAAGGAAGGCTGTGGAGATGGTGGAA GAGTGCCTGGACAAGTATTTCCAGCATCTTTGTGGTGACCTGGAGGCATTTGCTGCTCAT GCTGGCCGAAAGACTGTGAGGCCAGAGGACGTGGAGCTGCTGATGCGAAGGCAGGGCCTG GTCACCGACCAAGTCTCCCTGCACGTGCTTGTGGAGCGACACCTGCCCCTGGAGTACCGG CAGCTGCTCATCCCCTGTGCATTCAGTGGCAACTCTGTCTTCCCTGCCCGGTAGTGGCCA GGCCTCAACCCCTGCCTTGTCCCCACCTTTGCCCCACATACACTTCCAGGTTTTCTCCTT GCCCCCCAGCATCAATAAAGAGTCACAAATAGAATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTAACCCCGCCCTTCCTCACAGCAGGGTCCTGGGGGGCTGTTGAGGCCAAGGAGCCAGAA GGATCTTCAGAGGATGAAGATACCTCTGGTAGGACAGCAAGTCCAGAGTTGGCCTCCAGC ACCCCAGAGTTCCTTCAGGCCAGGCGACTTCAGGTTCTTGAACCAGCCCTACTGCCTAGC ACTGCAGTCTTACCTTCAGAACCTGCACAGCCTCTGTTGGCCAGGCTTCCTCCCAGGCCC CGCATCGCTGGTCCCAGGCCCCGTCCAGATCCCTACAAGGCTGGACTGAACCACTATGCT AAACTCTTTAGCTTTTATGCTAAGATGCCCATGGAAAGGAAGGCTGTGGAGATGGTGGAA GAGTGCCTGGACAAGTATTTCCAGCATCTTTGTGGTGACCTGGAGGCATTTGCTGCTCAT GCTGGCCGAAAGACTGTGAGGCCAGAGGACGTGGAGCTGCTGATGCGAAGGCAGGGCCTG GTCACCGACCAAGTCTCCCTGCACGTGCTTGTGGAGCGACACCTGCCCCTGGAGTACCGG CAGCTGCTCATCCCCTGTGCATTCAGTGGCAACTCTGTCTTCCCTGCCCGGTAGTGGCCA GGCCTCAACCCCTGCCTTGTCCCCACCTTTGCCCCACATACACTTCCAGGTTTTCTCCTT GCCCCCCAGCATCAATAAAGAGTCACAAATAGAATA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 190-365, gnl|bosTau2|chr18 (15017366-15017541) | |
| 190-365, gnl|canFam2|chr5 (84654350-84654155) | |
| 190-365, gnl|dasNov1|scaffold_63314 (8032-7830) | |
| 190-365, gnl|echTel1|scaffold_310190 (80348-80165) | |
| 190-365, gnl|hg17|chr16 (66420032-66420236) | |
| 190-365, gnl|Hg17|chr16 (66420246-66420071) | |
| 190-365, gnl|loxAfr1|scaffold_75293 (385-183) | |
| 190-365, gnl|mm7|chr8 (104444083-104444280) | |
| 190-365, gnl|Mm7|chr8 (104444290-104444115) | |
| 190-365, gnl|monDom2|scaffold_23 (18458120-18457852) | |
| 190-365, gnl|oryCun1|scaffold_204307 (136292-136098) | |
| 190-365, gnl|panTro1|chr18 (60716726-60716930) | |
| 190-365, gnl|rheMac2|chr20 (66157824-66158028) | |
| 190-365, gnl|rn3|chr19 (35685348-35685536) | |
| 469-696, gnl|bosTau2|chr18 (15017804-15018039) | |
| 469-696, gnl|canFam2|chr5 (84654575-84654808) | |
| 469-696, gnl|dasNov1|scaffold_63314 (8289-8525) | |
| 469-696, gnl|echTel1|scaffold_310190 (80613-80834) | |
| 469-696, gnl|Hg17|chr16 (66419796-66419559) | |
| 469-696, gnl|hg17|chr4 (83489535-83489769) | |
| 469-696, gnl|loxAfr1|scaffold_75293 (632-875) | |
| 469-696, gnl|mm7|chr8 (104443854-104443622) | |
| 469-696, gnl|Mm7|chr8 (104443852-104443617) | |
| 469-696, gnl|oryCun1|scaffold_204307 (136518-136739) | |
| 469-696, gnl|panTro1|chr3 (50219752-50219518) | |
| 469-696, gnl|rheMac2|chr5 (47383232-47382982) | |
| 469-696, gnl|rn3|chr19 (35685119-35684899) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 190-365, gnl|bosTau2|chr18 (15017366-15017541) | |
| 190-365, gnl|canFam2|chr5 (84654350-84654155) | |
| 190-365, gnl|dasNov1|scaffold_63314 (8032-7830) | |
| 190-365, gnl|echTel1|scaffold_310190 (80348-80165) | |
| 190-365, gnl|hg17|chr16 (66420032-66420236) | |
| 190-365, gnl|Hg17|chr16 (66420246-66420071) | |
| 190-365, gnl|loxAfr1|scaffold_75293 (385-183) | |
| 190-365, gnl|mm7|chr8 (104444083-104444280) | |
| 190-365, gnl|Mm7|chr8 (104444290-104444115) | |
| 190-365, gnl|monDom2|scaffold_23 (18458120-18457852) | |
| 190-365, gnl|oryCun1|scaffold_204307 (136292-136098) | |
| 190-365, gnl|panTro1|chr18 (60716726-60716930) | |
| 190-365, gnl|rheMac2|chr20 (66157824-66158028) | |
| 190-365, gnl|rn3|chr19 (35685348-35685536) | |
| 469-696, gnl|bosTau2|chr18 (15017804-15018039) | |
| 469-696, gnl|canFam2|chr5 (84654575-84654808) | |
| 469-696, gnl|dasNov1|scaffold_63314 (8289-8525) | |
| 469-696, gnl|echTel1|scaffold_310190 (80613-80834) | |
| 469-696, gnl|Hg17|chr16 (66419796-66419559) | |
| 469-696, gnl|hg17|chr4 (83489535-83489769) | |
| 469-696, gnl|loxAfr1|scaffold_75293 (632-875) | |
| 469-696, gnl|mm7|chr8 (104443854-104443622) | |
| 469-696, gnl|Mm7|chr8 (104443852-104443617) | |
| 469-696, gnl|oryCun1|scaffold_204307 (136518-136739) | |
| 469-696, gnl|panTro1|chr3 (50219752-50219518) | |
| 469-696, gnl|rheMac2|chr5 (47383232-47382982) | |
| 469-696, gnl|rn3|chr19 (35685119-35684899) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| fty (0.17584) | |
| ill (0.175593) |