Non-Coding RNA Search

Ss1.1-Pig4-TMW8014B20.3

Sequence:


               
               GTGGCGGCGCTGCTGCTTGGGCTGCTCGTAGAGTGCACAGAGGCCAAAAAGCATTGCTGG
TATTTTGAAGGACTCTATCCAACATATTACATATGCCGCCCTTATGAAGACTGCTGTGGC
TCCAGGTGCTGTGTGCGGGCCCTCTCCATTCAGAGGCTGTGGTACTTTTGGTTCCTCCTG
ATGATGGGCGTGCTTTTCTGCTGCGGAGCCGGCTTCTTCATCCGGAGGCGCATGTACCCC
CCGCCGCTGATCGAGGAGCCGGCCTTCAACGTGTCCTACACCAGGCAGCCCCCGACCCCC
GCTCCAGGTCAGCCAAGCCCTCCGTCCTTGTCTCTCCTCCCTGCAGTGTCCATGTCCCCT
GCAAGCCTTTGGAAAGGGCACTGCCACGGCATGTACTGGAAGAAAAACTGTATTCACTCA
AGTCCTGCGGCTCAGCCTTACTAGCCGTTGGTGCTGGTAGCACATGCAGCGCCTGCTGTG
TGGTGTGTCTGTCACCTGGTATTCTGTCGGTGCCCCTTTGATGCGTGGTTTTGCAGTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGCGGCGCTGCTGCTTGGGCTGCTCGTAGAGTGCACAGAGGCCAAAAAGCATTGCTGG
TATTTTGAAGGACTCTATCCAACATATTACATATGCCGCCCTTATGAAGACTGCTGTGGC
TCCAGGTGCTGTGTGCGGGCCCTCTCCATTCAGAGGCTGTGGTACTTTTGGTTCCTCCTG
ATGATGGGCGTGCTTTTCTGCTGCGGAGCCGGCTTCTTCATCCGGAGGCGCATGTACCCC
CCGCCGCTGATCGAGGAGCCGGCCTTCAACGTGTCCTACACCAGGCAGCCCCCGACCCCC
GCTCCAGGTCAGCCAAGCCCTCCGTCCTTGTCTCTCCTCCCTGCAGTGTCCATGTCCCCT
GCAAGCCTTTGGAAAGGGCACTGCCACGGCATGTACTGGAAGAAAAACTGTATTCACTCA
AGTCCTGCGGCTCAGCCTTACTAGCCGTTGGTGCTGGTAGCACATGCAGCGCCTGCTGTG
TGGTGTGTCTGTCACCTGGTATTCTGTCGGTGCCCCTTTGATGCGTGGTTTTGCAGTTTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61554592|gb|AAX46583.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61554592|gb|AAX46583.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               170-503, gnl|bosTau2|chr22 (578848-579176)
               

               
               170-503, gnl|Hg17|chr7 (55334321-55333981)
               

               
               170-503, gnl|Mm7|chr6 (57730687-57730363)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               170-503, gnl|bosTau2|chr22 (578848-579176)
               

               
               170-503, gnl|Hg17|chr7 (55334321-55333981)
               

               
               170-503, gnl|Mm7|chr6 (57730687-57730363)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ece (0.229305)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               ebs (0.118301)

	170-503, gnl\|bosTau2\|chr22 (578848-579176)
	170-503, gnl\|Hg17\|chr7 (55334321-55333981)
	170-503, gnl\|Mm7\|chr6 (57730687-57730363)