Ss1.1-Pig4-TMW8014F11.3
|
TCTAGCTACTGCCACGAAGGCAGCATGTCAGGCTCAGAGTTGCGCGCGGCGCTGGAGCAG
CGGCTCAGTGCCCTGGCCATCCGCACAGAGATCGTGGAGCACCCGGAGGTGTTTACAGTT
GAAGAAATGATGCCTCATATCCAACATTTGAAAGGAGCACATAGTAAGAACTTATTTCTT
AAAGACAAAAAGAAAAAAGGCTATTGGCTGGTGACAGTTCTTCATGATAGACAAATCAAT
TTAAATGATCTTGCCAAGCAGTTAGGTGTTGGGAGTGGAAATCTGCGGTTTGCTGATGAA
ACAGCCATGCTAGAAAAACTGAAAGTTGTCCAAGGCTGTGCGACACCATTGGCACTCTTC
TGTGATGATGGAGATGTGAAATTTGTTCTGGATTCTGCTTTTCTGGAAGGTGGACATGAA
AAGGTATACTTTCATCCAATGACCAACACTGCAACCATGGGACTGAGCCCTGAAGACTTT
CTCACATTTGTAAAGAACACAGGACATGATCCCATAATACTAAATTTTGATAAAAACTAA
TTAGGCTAATGCTTAAAATACATTTATTCCTGAAAGGTGATTTTCTTGTAATTTATAAAG
AGCATTAAAAGTCATATAATATAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TCTAGCTACTGCCACGAAGGCAGCATGTCAGGCTCAGAGTTGCGCGCGGCGCTGGAGCAG
CGGCTCAGTGCCCTGGCCATCCGCACAGAGATCGTGGAGCACCCGGAGGTGTTTACAGTT
GAAGAAATGATGCCTCATATCCAACATTTGAAAGGAGCACATAGTAAGAACTTATTTCTT
AAAGACAAAAAGAAAAAAGGCTATTGGCTGGTGACAGTTCTTCATGATAGACAAATCAAT
TTAAATGATCTTGCCAAGCAGTTAGGTGTTGGGAGTGGAAATCTGCGGTTTGCTGATGAA
ACAGCCATGCTAGAAAAACTGAAAGTTGTCCAAGGCTGTGCGACACCATTGGCACTCTTC
TGTGATGATGGAGATGTGAAATTTGTTCTGGATTCTGCTTTTCTGGAAGGTGGACATGAA
AAGGTATACTTTCATCCAATGACCAACACTGCAACCATGGGACTGAGCCCTGAAGACTTT
CTCACATTTGTAAAGAACACAGGACATGATCCCATAATACTAAATTTTGATAAAAACTAA
TTAGGCTAATGCTTAAAATACATTTATTCCTGAAAGGTGATTTTCTTGTAATTTATAAAG
AGCATTAAAAGTCATATAATATAAAAAAAAAAAAAA
|
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gi|56800438|emb|CAI36004.1| |
Protein identifier
|
gi|56800438|emb|CAI36004.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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107-623, gnl|bosTau2|chr11 (20358181-20358698) |
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107-623, gnl|canFam2|chr10 (59313770-59314220) |
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107-623, gnl|danRer3|chrNA (217310331-217309906) |
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107-623, gnl|dasNov1|scaffold_14953 (5512-5964) |
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107-623, gnl|echTel1|scaffold_180175 (2224-1795) |
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107-623, gnl|fr1|chrUn (203392883-203393496) |
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107-623, gnl|galGal2|chr3 (2349545-2349095) |
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107-623, gnl|hg17|chr2 (55422781-55423231) |
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107-623, gnl|Hg17|chr2 (55422788-55423311) |
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107-623, gnl|loxAfr1|scaffold_148145 (4542-4095) |
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107-623, gnl|mm7|chr11 (29465693-29465245) |
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107-623, gnl|Mm7|chr11 (29465684-29465245) |
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107-623, gnl|monDom2|scaffold_1 (18204710-18205155) |
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107-623, gnl|oryCun1|scaffold_194117 (5651-6097) |
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107-623, gnl|panTro1|chr12 (57553953-57554400) |
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107-623, gnl|rheMac2|chr13 (55608769-55609219) |
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107-623, gnl|rn3|chr14 (110558147-110557699) |
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107-623, gnl|tetNig1|chrUn_random (10075959-10076550) |
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107-623, gnl|xenTro1|scaffold_234 (761078-760638) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
107-623, gnl|bosTau2|chr11 (20358181-20358698) |
|
107-623, gnl|canFam2|chr10 (59313770-59314220) |
|
107-623, gnl|danRer3|chrNA (217310331-217309906) |
|
107-623, gnl|dasNov1|scaffold_14953 (5512-5964) |
|
107-623, gnl|echTel1|scaffold_180175 (2224-1795) |
|
107-623, gnl|fr1|chrUn (203392883-203393496) |
|
107-623, gnl|galGal2|chr3 (2349545-2349095) |
|
107-623, gnl|hg17|chr2 (55422781-55423231) |
|
107-623, gnl|Hg17|chr2 (55422788-55423311) |
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107-623, gnl|loxAfr1|scaffold_148145 (4542-4095) |
|
107-623, gnl|mm7|chr11 (29465693-29465245) |
|
107-623, gnl|Mm7|chr11 (29465684-29465245) |
|
107-623, gnl|monDom2|scaffold_1 (18204710-18205155) |
|
107-623, gnl|oryCun1|scaffold_194117 (5651-6097) |
|
107-623, gnl|panTro1|chr12 (57553953-57554400) |
|
107-623, gnl|rheMac2|chr13 (55608769-55609219) |
|
107-623, gnl|rn3|chr14 (110558147-110557699) |
|
107-623, gnl|tetNig1|chrUn_random (10075959-10076550) |
|
107-623, gnl|xenTro1|scaffold_234 (761078-760638) |
|
rec (0.865351) |
|
mga (0.32041) |
|
fat (0.294855) |
|
nca (0.273748) |
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ova (0.258264) |
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pgl (0.236967) |
|
pan (0.23596) |
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hea (0.204499) |
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cmu (0.186393) |
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gul (0.177588) |
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duo (0.172801) |
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ski (0.146735) |
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hlv (0.139256) |
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thg (0.126791) |
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eje (0.0988338) |
|
rec (0.865351) |
|
mga (0.32041) |
|
fat (0.294855) |
|
nca (0.273748) |
|
ova (0.258264) |
|
pgl (0.236967) |
|
pan (0.23596) |
|
hea (0.204499) |
|
cmu (0.186393) |
|
gul (0.177588) |
|
duo (0.172801) |
|
ski (0.146735) |
|
hlv (0.139256) |
|
thg (0.126791) |
|
eje (0.0988338) |
