Non-Coding RNA Search

Ss1.1-Pig4-TMW8014L10.3

Sequence:


               
               CGGGCCCCCCCCTTATCTTTTGGTGGCCTTAGTTAAAAGCATTGCGTGAATGCACAGATA
GCAGTGGTGGAGGGGGCGGAGGGAAACCCCCTCCCTTGTCACTCTCCTTCGAGAAGAGAA
GAGAGCCTTAAGCCGTCTTTACAGATTTGCAGTAAAGTCCTTTCGGCTCAGCTGAGCTCC
ATCCTCAGCACCAGCCCCCTTGCAAAACTGGAAAGACAGTTGATGGTTGAGTAATTCATG
GGGTGTATTCTGGCTACTAATGTTACTGAAATCTGTAATTGTGTCTGTGCTACTTTTTTG
CTTTGTGGCTTTTGTATTTGTAATTGGATGACACCCAAAGCATTTCTGTGTCTTACCTCT
TCTTAATTTTCTGCACGTTGGTTTTGTTTCCCCCTTTGTTGCTAACCCCATAAAGAGTAT
TCAGTTCTCAAAACACATTAAAAATGATTTGCCTGCTAAAAAAAAAAAAAAAAAAGTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGCCCCCCCCTTATCTTTTGGTGGCCTTAGTTAAAAGCATTGCGTGAATGCACAGATA
GCAGTGGTGGAGGGGGCGGAGGGAAACCCCCTCCCTTGTCACTCTCCTTCGAGAAGAGAA
GAGAGCCTTAAGCCGTCTTTACAGATTTGCAGTAAAGTCCTTTCGGCTCAGCTGAGCTCC
ATCCTCAGCACCAGCCCCCTTGCAAAACTGGAAAGACAGTTGATGGTTGAGTAATTCATG
GGGTGTATTCTGGCTACTAATGTTACTGAAATCTGTAATTGTGTCTGTGCTACTTTTTTG
CTTTGTGGCTTTTGTATTTGTAATTGGATGACACCCAAAGCATTTCTGTGTCTTACCTCT
TCTTAATTTTCTGCACGTTGGTTTTGTTTCCCCCTTTGTTGCTAACCCCATAAAGAGTAT
TCAGTTCTCAAAACACATTAAAAATGATTTGCCTGCTAAAAAAAAAAAAAAAAAAGTCTC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               154-458, gnl|bosTau2|chr18 (12035389-12035086)
               

               
               154-458, gnl|Hg17|chr16 (83258361-83258663)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               154-458, gnl|bosTau2|chr18 (12035389-12035086)
               

               
               154-458, gnl|Hg17|chr16 (83258361-83258663)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fce (0.271592)
               

               
               col (0.195008)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               col (0.195008)

	154-458, gnl\|bosTau2\|chr18 (12035389-12035086)
	154-458, gnl\|Hg17\|chr16 (83258361-83258663)