Non-Coding RNA Search

Ss1.1-Pig4-TMW8014P09.5

Sequence:


               
               GATTTAAGACAGGCTATTTTTGACCCAAAGACAAGAGGATCCCATACAATATTTTTATTT
ATTGTTCATTTGTTAGACAAAAACATGGCAGTGTGTTTTGAAAACGTAAATATGCTTTAA
CATCTATTTCCATAAATCCCTAATTTACCTCTGTAGATATATATGAACTGTGTATTATTT
ATGCATTTTTGTCTAACTTTCTGTACCTAGTAATTTTCATTCATAAAGAACATGCTTATT
GGGAAAGGGAATTAATGTAACAGCTATTCATGCTCTTTATAAAGTGATCTACCTCTTAGT
TATTTTTTAAAAGCCAGCCTTTTTTTTTTTAAATCATCATATTCTTCTTAAGACTATCTT
TGCTACCTCTAATAATATAGAATAGGCATAGTACTAAAAATGGCACATGAGTTTTGTCCA
TGACAACAGTTTGATGAAGTCTAGATGTGTTTTTAATCTGCAGATATCTAATTTCTCTTA
GGAAAATTACCTATAACCTCAGTCTAATCTTGAGAAAAACATCAGACAATTCCAGTAGAG
GGTCTTCCTAAAAAATACTTGAGCAGTACTCCGAGCTATCAAGGTCATCAAAAACAGAGA
AAGTCTGAGACACTGTCACACCCAAGGGAAGCCCAGTGGAACATGACAAGTCAGAAGTGC
GGACCAGGAACACAAAAAGGACATTAGGTAAAAACTAAGGAAATCTGAATAAGTCACAGA
CTTTAGTTAATAGTAATGTATCAGTATTTGTTTATTAATTGTAACAAATGTACCATAGTA
ATTAATGTAAGATGTTAATAATGGGAGAAACTGGGAGAGGGGTATATGGGAACTCTGTAC
TGTTGTCTCAATTTTTCTGTAAATCTAAACTGTTCTAAAAAAAAATAAAGTCTATTTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTTAAGACAGGCTATTTTTGACCCAAAGACAAGAGGATCCCATACAATATTTTTATTT
ATTGTTCATTTGTTAGACAAAAACATGGCAGTGTGTTTTGAAAACGTAAATATGCTTTAA
CATCTATTTCCATAAATCCCTAATTTACCTCTGTAGATATATATGAACTGTGTATTATTT
ATGCATTTTTGTCTAACTTTCTGTACCTAGTAATTTTCATTCATAAAGAACATGCTTATT
GGGAAAGGGAATTAATGTAACAGCTATTCATGCTCTTTATAAAGTGATCTACCTCTTAGT
TATTTTTTAAAAGCCAGCCTTTTTTTTTTTAAATCATCATATTCTTCTTAAGACTATCTT
TGCTACCTCTAATAATATAGAATAGGCATAGTACTAAAAATGGCACATGAGTTTTGTCCA
TGACAACAGTTTGATGAAGTCTAGATGTGTTTTTAATCTGCAGATATCTAATTTCTCTTA
GGAAAATTACCTATAACCTCAGTCTAATCTTGAGAAAAACATCAGACAATTCCAGTAGAG
GGTCTTCCTAAAAAATACTTGAGCAGTACTCCGAGCTATCAAGGTCATCAAAAACAGAGA
AAGTCTGAGACACTGTCACACCCAAGGGAAGCCCAGTGGAACATGACAAGTCAGAAGTGC
GGACCAGGAACACAAAAAGGACATTAGGTAAAAACTAAGGAAATCTGAATAAGTCACAGA
CTTTAGTTAATAGTAATGTATCAGTATTTGTTTATTAATTGTAACAAATGTACCATAGTA
ATTAATGTAAGATGTTAATAATGGGAGAAACTGGGAGAGGGGTATATGGGAACTCTGTAC
TGTTGTCTCAATTTTTCTGTAAATCTAAACTGTTCTAAAAAAAAATAAAGTCTATTTTAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               489-885, gnl|bosTau2|chrX (23194127-23193711)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               489-885, gnl|bosTau2|chrX (23194127-23193711)

Expressed library(ies): 7 entry(ies)

More info

Expressed library(ies): 7 entry(ies)

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               ret (0.257467)
               

               
               gul (0.177588)
               

               
               fco (0.157208)
               

               
               isp (0.150376)
               

               
               ski (0.146735)
               

               
               ova (0.129132)
               

               
               sug (0.127291)

Expressed library(ies): 7 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.257467)
               

               
               gul (0.177588)
               

               
               fco (0.157208)
               

               
               isp (0.150376)
               

               
               ski (0.146735)
               

               
               ova (0.129132)
               

               
               sug (0.127291)

	ret (0.257467)
	gul (0.177588)
	fco (0.157208)
	isp (0.150376)
	ski (0.146735)
	ova (0.129132)
	sug (0.127291)