Ss1.1-Pig4-TMW8015J21.5
|
AAAAACGTGGCGAAGGCCCGGAGGTTAATCTCCTGGAGCAGAGAATAGAGGCAGCCAAGA
AGAATGCTGATGAACCAGTTAGGAGACTCTTGCAGCCATCACAGCAAGAGATGATGTTAA
TGTGATCCTGGGAGAAGGCCCAGCAAATGCAGAAAACTGGTCAGATTCCAGAGCACTATT
CCTGGATTGAGCTGAAGTTGTGCGGGAGAAGCGTAGCATGGAAGGGAGACAGAGTATCGG
AGGAGAGAAAAACAGCACCAACTCCATCTTGGTTGTCCATGGTTTGGCATGGACATCGGT
GGGACTCTAGTTAAGCTGGTCTACTTTGAACCCAAGGATATTACAGCTGAAGAGGAGCAG
GAGGAAGTGGAGAACCTGAAGAGCATCAGGAAGTATCTGACTTCTAACACTGCCTATGGG
AAAACCGGGATCCGAGATGTCCACCTGGAACTGAAAAACTTGACCATGTGTGGACGGAAG
GGAAACCTGCACTTCATCCGCTTTCCCAGTTGCGCGATGCACAGGTTCATCCAGATGGGC
AGCGAGAAGAACTTCTCCAGCCTCCACACCACCCTCTGTGCCACGGGAGGCGGGGCTTTC
AAGTTTGAAGAGGACTTTAGAACGATCGCTGACCTGCAGCTCCATAAACTGGATGAACTG
GACTGTCTCATTCAGGGCCTGCTTTATGTTGACTCCGTCGGCTTCAACGGCAAGCCGGAA
TGTTATTATTTTGAGAATCCCACAAATCCCGAATTGTGTCAAAAAAAGCCGTACTGCCTG
GATAACCCATACCCTATGTTGCTGGTGAACATGGGCTCAGGTGTGAGCATTCTAGCAGTG
TACTCCAAGGACAACTATAAAAGAGTGACAGGGACCAGGTAAATATGGTTTCCACTAGGA
GAACCTTTTTGTGCTTCAACCCAGGCCTCCTCCTTGAAAACCGGTTTCTAAAAAGGTTCT
TTCTATTGAATATGTTTTTAAAAGAAAGATCTTACCCTCCTCAGCCAATCAGAAATGACC
TATTGGATATGTTACACACAGTGATTTATATAAAGGTTAATAAAGTACAGCCCTTGCTTT
TGCTGGAAGCGGGTCATGTTGAGGGAAGAAAGGTCACACATACCAAAGTTTGCCCAAAAG
CAGTACCTAGTAGGTGCCAGGTGAAGGGCAGGGACCATAAGCACAGCAGAATCCAGATGG
AAGGATGCTTGGGATGGGCTGAGAGGGTTTCAAGAACCCTTCTTTTGAAACTACCTTAGT
TCCTAGCGCAGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAAAACGTGGCGAAGGCCCGGAGGTTAATCTCCTGGAGCAGAGAATAGAGGCAGCCAAGA
AGAATGCTGATGAACCAGTTAGGAGACTCTTGCAGCCATCACAGCAAGAGATGATGTTAA
TGTGATCCTGGGAGAAGGCCCAGCAAATGCAGAAAACTGGTCAGATTCCAGAGCACTATT
CCTGGATTGAGCTGAAGTTGTGCGGGAGAAGCGTAGCATGGAAGGGAGACAGAGTATCGG
AGGAGAGAAAAACAGCACCAACTCCATCTTGGTTGTCCATGGTTTGGCATGGACATCGGT
GGGACTCTAGTTAAGCTGGTCTACTTTGAACCCAAGGATATTACAGCTGAAGAGGAGCAG
GAGGAAGTGGAGAACCTGAAGAGCATCAGGAAGTATCTGACTTCTAACACTGCCTATGGG
AAAACCGGGATCCGAGATGTCCACCTGGAACTGAAAAACTTGACCATGTGTGGACGGAAG
GGAAACCTGCACTTCATCCGCTTTCCCAGTTGCGCGATGCACAGGTTCATCCAGATGGGC
AGCGAGAAGAACTTCTCCAGCCTCCACACCACCCTCTGTGCCACGGGAGGCGGGGCTTTC
AAGTTTGAAGAGGACTTTAGAACGATCGCTGACCTGCAGCTCCATAAACTGGATGAACTG
GACTGTCTCATTCAGGGCCTGCTTTATGTTGACTCCGTCGGCTTCAACGGCAAGCCGGAA
TGTTATTATTTTGAGAATCCCACAAATCCCGAATTGTGTCAAAAAAAGCCGTACTGCCTG
GATAACCCATACCCTATGTTGCTGGTGAACATGGGCTCAGGTGTGAGCATTCTAGCAGTG
TACTCCAAGGACAACTATAAAAGAGTGACAGGGACCAGGTAAATATGGTTTCCACTAGGA
GAACCTTTTTGTGCTTCAACCCAGGCCTCCTCCTTGAAAACCGGTTTCTAAAAAGGTTCT
TTCTATTGAATATGTTTTTAAAAGAAAGATCTTACCCTCCTCAGCCAATCAGAAATGACC
TATTGGATATGTTACACACAGTGATTTATATAAAGGTTAATAAAGTACAGCCCTTGCTTT
TGCTGGAAGCGGGTCATGTTGAGGGAAGAAAGGTCACACATACCAAAGTTTGCCCAAAAG
CAGTACCTAGTAGGTGCCAGGTGAAGGGCAGGGACCATAAGCACAGCAGAATCCAGATGG
AAGGATGCTTGGGATGGGCTGAGAGGGTTTCAAGAACCCTTCTTTTGAAACTACCTTAGT
TCCTAGCGCAGG
|
|
gi|55634153|ref|XP_507906.1| |
Protein identifier
|
gi|55634153|ref|XP_507906.1| |
|
22-173, gnl|bosTau2|chr26 (7037813-7037964) |
|
22-173, gnl|canFam2|chr28 (7579459-7579591) |
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22-173, gnl|hg17|chr10 (91449238-91449400) |
|
22-173, gnl|Hg17|chr10 (91449410-91449261) |
|
22-173, gnl|oryCun1|scaffold_89004 (4403-4249) |
|
22-173, gnl|panTro1|chr8 (93149036-93149198) |
|
22-173, gnl|rheMac2|chr9 (89244923-89245065) |
| |
|
265-618, gnl|bosTau2|chr13 (33893771-33894124) |
|
265-618, gnl|Hg17|chr20 (3836566-3836919) |
|
265-618, gnl|Mm7|chr2 (131014758-131015110) |
| |
|
624-881, gnl|bosTau2|chr13 (33899171-33899428) |
|
624-881, gnl|Hg17|chr20 (3839223-3839480) |
|
624-881, gnl|Mm7|chr2 (131021009-131021266) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
22-173, gnl|bosTau2|chr26 (7037813-7037964) |
|
22-173, gnl|canFam2|chr28 (7579459-7579591) |
|
22-173, gnl|hg17|chr10 (91449238-91449400) |
|
22-173, gnl|Hg17|chr10 (91449410-91449261) |
|
22-173, gnl|oryCun1|scaffold_89004 (4403-4249) |
|
22-173, gnl|panTro1|chr8 (93149036-93149198) |
|
22-173, gnl|rheMac2|chr9 (89244923-89245065) |
| |
|
265-618, gnl|bosTau2|chr13 (33893771-33894124) |
|
265-618, gnl|Hg17|chr20 (3836566-3836919) |
|
265-618, gnl|Mm7|chr2 (131014758-131015110) |
| |
|
624-881, gnl|bosTau2|chr13 (33899171-33899428) |
|
624-881, gnl|Hg17|chr20 (3839223-3839480) |
|
624-881, gnl|Mm7|chr2 (131021009-131021266) |
|
cst (0.140036) |
|
nmm (0.132802) |
|
cst (0.140036) |
|
nmm (0.132802) |
