Non-Coding RNA Search

Ss1.1-Pig4-TMW8015M08.3

Sequence:


               
               GAGATTTGGACTACATGGCGGATGGGTGTTAAGTTCTGCACACGGTGAAACAAGCAGACG
GGCTCACAAGAAGACCTCTTAAAATAACAACCTTCATTGGCTCTCGGGGCCACCAGTAGC
TTCTGAGTTGGCTTAAAACACGTGACGATGTGTTTAAAAGTACTCTGCTAATACTTTCTT
GAAACGTGGCCTCTCAATGTATTTTCACCGTAAATCTGAGCACTGGAAACAGTTTCGTGG
AGTTTCAGCTGAATGAACATCGGCCATGAACATCCATCAAAAATGAACACTTGGGGATCA
GTGGTCTTATTTTTAGAAAAAGAAAACTCTTCTGCAGCCCCCAGCTTCGCCGTATGCCTG
CCTTCAGTGGCAGGAAAATGAATCAGCCAACTCTCTCAGCCGCGTCTTACAAAAAGAGAG
AAGGGGCTCGGGTGCCGTTACTGCGCATACATAGCACGATTCCGTTTGAATAAGGCAGAT
GCTCTTGTTTTTTTTTTTTAAGAAATTACTGTCATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGATTTGGACTACATGGCGGATGGGTGTTAAGTTCTGCACACGGTGAAACAAGCAGACG
GGCTCACAAGAAGACCTCTTAAAATAACAACCTTCATTGGCTCTCGGGGCCACCAGTAGC
TTCTGAGTTGGCTTAAAACACGTGACGATGTGTTTAAAAGTACTCTGCTAATACTTTCTT
GAAACGTGGCCTCTCAATGTATTTTCACCGTAAATCTGAGCACTGGAAACAGTTTCGTGG
AGTTTCAGCTGAATGAACATCGGCCATGAACATCCATCAAAAATGAACACTTGGGGATCA
GTGGTCTTATTTTTAGAAAAAGAAAACTCTTCTGCAGCCCCCAGCTTCGCCGTATGCCTG
CCTTCAGTGGCAGGAAAATGAATCAGCCAACTCTCTCAGCCGCGTCTTACAAAAAGAGAG
AAGGGGCTCGGGTGCCGTTACTGCGCATACATAGCACGATTCCGTTTGAATAAGGCAGAT
GCTCTTGTTTTTTTTTTTTAAGAAATTACTGTCATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-512, gnl|bosTau2|chr3 (45624908-45624385)
               

               
               1-512, gnl|Hg17|chr1 (89011121-89011641)
               

               
               1-512, gnl|Mm7|chr3 (142686781-142686302)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-512, gnl|bosTau2|chr3 (45624908-45624385)
               

               
               1-512, gnl|Hg17|chr1 (89011121-89011641)
               

               
               1-512, gnl|Mm7|chr3 (142686781-142686302)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lnt (0.142308)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)

	1-512, gnl\|bosTau2\|chr3 (45624908-45624385)
	1-512, gnl\|Hg17\|chr1 (89011121-89011641)
	1-512, gnl\|Mm7\|chr3 (142686781-142686302)