Non-Coding RNA Search

Ss1.1-Pig4-TMW8016H24.3

Sequence:


               
               TCTGGCCGGGTGGTGCGTGTCCTCAGAAGATGGCAGCTGCTGTCACGTGTAGCTTTTCCC
ATGGCCCCGGGTTCCCGGTCCTACGCCTTGCTGGGGGGAGCAGTGCACATGAGGGCCGAG
TGGAGCTCTACCATGCCGGTCAGTGGGGGACTGTCTGTGACGACCAGTGGGATGATGCAG
ATGCAGAAGTGGTCTGCAGGCAGCTGGGCCTGAGTGGCATTGCCAAAGCATGGAGTCAGG
CATATTTTGGGGAAGGATCTGGCCCAGTAATGTTGGATGAAGTACGCTGCACCGGGAATG
AGCTTTCTATTGAGCAATGTCCAAAGAGTTCCTGGGGAGAGCACAACTGTGACCATAAAG
AAGATGCTGGAGTGTCCTGTACCCCTCTGACAGACGGGGTCATCAGACTTGCAGGCAATA
AAAACAACCATGAAGGTCGCCTGGAGGTGTATCACAAGGGACAGTGGGGGACTGTCTGTG
ACGATGGCTGGACTGAGCTGAATACATATGTGGTTTGCCGACAGCTGGGATTTAAGTAAG
ATCCATTGATGCAAGGCAGCAAAATGCCAAGTTATATTTTCTAAAGTCTCATTTTGTAAT
CCTTACTTGTAATTTCCATTATACTAAAAATAAAATGATGTTCTCTCTCATTATCTACCT
ACCTTCCTACCTTCTTATCTGCTTATCTACATATTATAGTTCAACAATAAAAGGGCAATC
ATTTTTTTTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTGGCCGGGTGGTGCGTGTCCTCAGAAGATGGCAGCTGCTGTCACGTGTAGCTTTTCCC
ATGGCCCCGGGTTCCCGGTCCTACGCCTTGCTGGGGGGAGCAGTGCACATGAGGGCCGAG
TGGAGCTCTACCATGCCGGTCAGTGGGGGACTGTCTGTGACGACCAGTGGGATGATGCAG
ATGCAGAAGTGGTCTGCAGGCAGCTGGGCCTGAGTGGCATTGCCAAAGCATGGAGTCAGG
CATATTTTGGGGAAGGATCTGGCCCAGTAATGTTGGATGAAGTACGCTGCACCGGGAATG
AGCTTTCTATTGAGCAATGTCCAAAGAGTTCCTGGGGAGAGCACAACTGTGACCATAAAG
AAGATGCTGGAGTGTCCTGTACCCCTCTGACAGACGGGGTCATCAGACTTGCAGGCAATA
AAAACAACCATGAAGGTCGCCTGGAGGTGTATCACAAGGGACAGTGGGGGACTGTCTGTG
ACGATGGCTGGACTGAGCTGAATACATATGTGGTTTGCCGACAGCTGGGATTTAAGTAAG
ATCCATTGATGCAAGGCAGCAAAATGCCAAGTTATATTTTCTAAAGTCTCATTTTGTAAT
CCTTACTTGTAATTTCCATTATACTAAAAATAAAATGATGTTCTCTCTCATTATCTACCT
ACCTTCCTACCTTCTTATCTGCTTATCTACATATTATAGTTCAACAATAAAAGGGCAATC
ATTTTTTTTTTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               63-214, gnl|bosTau2|chr6 (2147949-2147798)
               

               
               63-214, gnl|Hg17|chr4 (119610625-119610474)
               

               
               63-214, gnl|Mm7|chr3 (123303365-123303516)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               63-214, gnl|bosTau2|chr6 (2147949-2147798)
               

               
               63-214, gnl|Hg17|chr4 (119610625-119610474)
               

               
               63-214, gnl|Mm7|chr3 (123303365-123303516)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	63-214, gnl\|bosTau2\|chr6 (2147949-2147798)
	63-214, gnl\|Hg17\|chr4 (119610625-119610474)
	63-214, gnl\|Mm7\|chr3 (123303365-123303516)