Non-Coding RNA Search

Ss1.1-Pig4-TMW8016O16.5

Sequence:


               
               CACCCTCAGATAAAAAAGCTCAATAGCATCTTCACAAGAGGATCCAACAAGAACCCAGCC
AGCCCCTCCGGTTCCTGGGCTTCTGCCACGGCCACAGGTGCAGGTCCCAAGGAGTACAGA
CCGGGACCATCTGGGAAGAGCTGAAACACGGCACCAATAAACGAGCAGACCTTACCTGTG
GTTTCACATTCTCAAACGCACTTCCATGTCTCTCGGAAGCATTTCTTTTCCTTGCTGGTG
TAGATCCAAGGCTGTTTCTATTTTCTTATTTCTCTCTGCTTTATGCACTTTAAGGGGAAA
AAGCTAAAAGGAAAAATGGAAATGTGGTTTTAAGTCCTTTATGTGCCACTTAGTGCCTTT
TAAGATTGAATCCATGCTTTTGAGGACATGATCGGGAGAGAATTGAGGATAACCTCATGA
AAGATGCTGTTTTGTGGTGAATTGTCGGTTCTTTCGTACCTTACTCTTTTGAGAAGGATT
CCTTTTTTTAAAAGTTTACAAAACTTGCAAAAGCTTCAGAGCTAAAGACTGACCGAAAAC
GATGCCATTACACTTTAAAAATCTTCATAATAGAGAATTGTGTTTGCCACACAGTATGGA
AACATTGTATATTTAAATCTACTTTACACTGAAATTTAGGGTCTGTTACCTGACAGTCTG
GCAGTTTTGTTGGAACATACTCTGTGTTTTTTTTTTTTTTTTGCCTTCATTCATTCCTGC
AGCTTCTTTCTAGAAAAGAGGAGACAAACATGCCTTGAAAAGCCAGAGCAGCTCCTATTA
AGAGGAAGGAGCTTAATACTTACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACCCTCAGATAAAAAAGCTCAATAGCATCTTCACAAGAGGATCCAACAAGAACCCAGCC
AGCCCCTCCGGTTCCTGGGCTTCTGCCACGGCCACAGGTGCAGGTCCCAAGGAGTACAGA
CCGGGACCATCTGGGAAGAGCTGAAACACGGCACCAATAAACGAGCAGACCTTACCTGTG
GTTTCACATTCTCAAACGCACTTCCATGTCTCTCGGAAGCATTTCTTTTCCTTGCTGGTG
TAGATCCAAGGCTGTTTCTATTTTCTTATTTCTCTCTGCTTTATGCACTTTAAGGGGAAA
AAGCTAAAAGGAAAAATGGAAATGTGGTTTTAAGTCCTTTATGTGCCACTTAGTGCCTTT
TAAGATTGAATCCATGCTTTTGAGGACATGATCGGGAGAGAATTGAGGATAACCTCATGA
AAGATGCTGTTTTGTGGTGAATTGTCGGTTCTTTCGTACCTTACTCTTTTGAGAAGGATT
CCTTTTTTTAAAAGTTTACAAAACTTGCAAAAGCTTCAGAGCTAAAGACTGACCGAAAAC
GATGCCATTACACTTTAAAAATCTTCATAATAGAGAATTGTGTTTGCCACACAGTATGGA
AACATTGTATATTTAAATCTACTTTACACTGAAATTTAGGGTCTGTTACCTGACAGTCTG
GCAGTTTTGTTGGAACATACTCTGTGTTTTTTTTTTTTTTTTGCCTTCATTCATTCCTGC
AGCTTCTTTCTAGAAAAGAGGAGACAAACATGCCTTGAAAAGCCAGAGCAGCTCCTATTA
AGAGGAAGGAGCTTAATACTTACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-801, gnl|bosTau2|chr29 (35060289-35061090)
               

               
               3-801, gnl|Hg17|chr11 (63153390-63152280)
               

               
               3-801, gnl|Mm7|chr19 (7353873-7354820)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-801, gnl|bosTau2|chr29 (35060289-35061090)
               

               
               3-801, gnl|Hg17|chr11 (63153390-63152280)
               

               
               3-801, gnl|Mm7|chr19 (7353873-7354820)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	3-801, gnl\|bosTau2\|chr29 (35060289-35061090)
	3-801, gnl\|Hg17\|chr11 (63153390-63152280)
	3-801, gnl\|Mm7\|chr19 (7353873-7354820)