Non-Coding RNA Search

Ss1.1-Pig4-TMW8017C02.5

Sequence:


               
               TGAAAAGTTCATGATCTATTTTTAGTGTCATTACATATACTATAAAATGTGAAGGATTAA
CTGTCTGATCAGCTGTATGGCATTTTCTATGGCTCATTGGTAGTAAGCATTGTAAGATAA
GTTAAAATACACATTTAATTGTTTAGGGATAATAATTAAAATCACAATGACTGTGTGTAC
CCTTTTAAAAATTGCAGATTCTTTGAATTTGTGGAATTACATGTTATCTAAATTTTATCT
TCATTTTTGAAAGATGTTCTTTCTTGGGTGGTTTTATTTAAGCTGGTTAGGTTTTTTTTG
AAGTTGGGTATTCAGAAACTAGATTGTTAGGCATTTAGCATTAATCATTTTTGAATGTTT
TTGATGTATTTCAGTTGACTAACCAAAACCCTCAGCTCTTTGTTTATTTTGTTTTTTTCT
TTTTCATTATAAATATACTTTTTAAAATGGAAATCCGTTATTTAGGCTGGTAGCACTAAA
TTAGCTTTTTTTTTTTACCTGACCTGAGTAGGAAAATATCATGGACAATTTTGGTGTTTA
GTAAGCTTTGTTACTTTCCCACCTCTGAATAGCACTTTATGACATAGGCTGAACTAAACA
CATATGCAGTGTTCTGTGGATCATTGTGCAATAAAGCTGCTAAAGTCACATGTGTGGTAA
AGTTTGGTAGTCTTAAGCCTGTGAAGCACATATCATGTAGACATTTTAAGTATAAAGCTT
TAATAGGAGTAGGAAAACCGCTTAAAATGTTGTATAGTTGCATATAAATTGTTCTGGGCT
TCTTTCATTTTTAATAAAAATTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAAAAGTTCATGATCTATTTTTAGTGTCATTACATATACTATAAAATGTGAAGGATTAA
CTGTCTGATCAGCTGTATGGCATTTTCTATGGCTCATTGGTAGTAAGCATTGTAAGATAA
GTTAAAATACACATTTAATTGTTTAGGGATAATAATTAAAATCACAATGACTGTGTGTAC
CCTTTTAAAAATTGCAGATTCTTTGAATTTGTGGAATTACATGTTATCTAAATTTTATCT
TCATTTTTGAAAGATGTTCTTTCTTGGGTGGTTTTATTTAAGCTGGTTAGGTTTTTTTTG
AAGTTGGGTATTCAGAAACTAGATTGTTAGGCATTTAGCATTAATCATTTTTGAATGTTT
TTGATGTATTTCAGTTGACTAACCAAAACCCTCAGCTCTTTGTTTATTTTGTTTTTTTCT
TTTTCATTATAAATATACTTTTTAAAATGGAAATCCGTTATTTAGGCTGGTAGCACTAAA
TTAGCTTTTTTTTTTTACCTGACCTGAGTAGGAAAATATCATGGACAATTTTGGTGTTTA
GTAAGCTTTGTTACTTTCCCACCTCTGAATAGCACTTTATGACATAGGCTGAACTAAACA
CATATGCAGTGTTCTGTGGATCATTGTGCAATAAAGCTGCTAAAGTCACATGTGTGGTAA
AGTTTGGTAGTCTTAAGCCTGTGAAGCACATATCATGTAGACATTTTAAGTATAAAGCTT
TAATAGGAGTAGGAAAACCGCTTAAAATGTTGTATAGTTGCATATAAATTGTTCTGGGCT
TCTTTCATTTTTAATAAAAATTAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               547-804, gnl|bosTau2|chr4 (29655413-29655656)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               547-804, gnl|bosTau2|chr4 (29655413-29655656)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fco (0.471624)
               

               
               eye (0.170503)
               

               
               lin (0.145603)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.471624)
               

               
               eye (0.170503)
               

               
               lin (0.145603)