Ss1.1-Pig4-TMW8017D11.5
|
TTAAAAATGGGAGTCTGGGAGCGGGTGTGGGGCGGTCTCGGATTTCCTAATCTTTGCCAA
GACCTGGAGAGGGGAAGAGGATGGGCTACCTGAGGATGAAATGAAGAATCCCGAGGGCAG
GGTGGCAGGGCTCGGGGTGATGAGTGTCAGGCTCAAGAGGAGAGAAATGACAAGGTAGAC
TCTCAGGAGCCACAGCTAACAAGGATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGGGC
CGGGGGGCGAGAAATGCCCGCGTCCTCCGGGGGATTCTCTCAGGAGCCACAGCTAACAAG
GCTTCCCAGAACAGGACCCGGGCACTGCAAAGCCAGAGCTCCCCAGAGTGCAAGGAGGAG
CCTGAACCCCTACCCCCTGAGCTGGAATACATTCCCAGAAAGAGGGGCAAGAACCCCATG
AAAGCTGTGGGACTAGCCTGGGCCATCGGCTTCCCCTGTGGTATCCTCCTCTTCATCCTC
ACCAAGCGGGAAGTGGACAAGGACCGTTTGAAGCAGATGAAGGCTCGGCAGAACATGCGG
GCATCCAACACGGGCGAGTATGAGAGTCAGAGGTTCAGGGCCTCCTCCCATCATGCCCCG
TCTCCTGAAGCTGTGTCCGGGGTGCAGTCGTGAGGAACACTGCAACCCTCCCCTAGACTG
TGGCCTCCCAACTGTCAAGTCCTTTGGCTTTGGCCATGATTCTGGTCCTTGCCTCTGAGG
CCCACCAGAGGGCGCATGAAGCCCAGGCTGCTGCCGGCCCTACCCTTCCCCTCCCTAGAA
ACCAGCCGAAGGCAAATAAAGTTACTGAGTGTTTGAGTGGAAAGGAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTAAAAATGGGAGTCTGGGAGCGGGTGTGGGGCGGTCTCGGATTTCCTAATCTTTGCCAA
GACCTGGAGAGGGGAAGAGGATGGGCTACCTGAGGATGAAATGAAGAATCCCGAGGGCAG
GGTGGCAGGGCTCGGGGTGATGAGTGTCAGGCTCAAGAGGAGAGAAATGACAAGGTAGAC
TCTCAGGAGCCACAGCTAACAAGGATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGGGC
CGGGGGGCGAGAAATGCCCGCGTCCTCCGGGGGATTCTCTCAGGAGCCACAGCTAACAAG
GCTTCCCAGAACAGGACCCGGGCACTGCAAAGCCAGAGCTCCCCAGAGTGCAAGGAGGAG
CCTGAACCCCTACCCCCTGAGCTGGAATACATTCCCAGAAAGAGGGGCAAGAACCCCATG
AAAGCTGTGGGACTAGCCTGGGCCATCGGCTTCCCCTGTGGTATCCTCCTCTTCATCCTC
ACCAAGCGGGAAGTGGACAAGGACCGTTTGAAGCAGATGAAGGCTCGGCAGAACATGCGG
GCATCCAACACGGGCGAGTATGAGAGTCAGAGGTTCAGGGCCTCCTCCCATCATGCCCCG
TCTCCTGAAGCTGTGTCCGGGGTGCAGTCGTGAGGAACACTGCAACCCTCCCCTAGACTG
TGGCCTCCCAACTGTCAAGTCCTTTGGCTTTGGCCATGATTCTGGTCCTTGCCTCTGAGG
CCCACCAGAGGGCGCATGAAGCCCAGGCTGCTGCCGGCCCTACCCTTCCCCTCCCTAGAA
ACCAGCCGAAGGCAAATAAAGTTACTGAGTGTTTGAGTGGAAAGGAAA
|
|
6-176, gnl|bosTau2|chr2 (64631855-64632024) |
|
6-176, gnl|canFam2|chr37 (27949806-27950410) |
|
6-176, gnl|dasNov1|scaffold_12456 (9921-9374) |
|
6-176, gnl|hg17|chr2 (218962120-218962629) |
|
6-176, gnl|Hg17|chr2 (218962394-218962538) |
|
6-176, gnl|mm7|chr1 (74526000-74526596) |
|
6-176, gnl|Mm7|chr1 (74526333-74526495) |
|
6-176, gnl|oryCun1|scaffold_211393 (82704-83165) |
|
6-176, gnl|panTro1|chr13 (109119341-109119858) |
|
6-176, gnl|rheMac2|chr12 (82092888-82093409) |
|
6-176, gnl|rn3|chr9 (73759883-73760504) |
| |
|
205-828, gnl|bosTau2|chr18 (42249435-42248825) |
|
205-828, gnl|Hg17|chrX (130663304-130662690) |
|
205-828, gnl|Mm7|chr1 (74524744-74527108) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
6-176, gnl|bosTau2|chr2 (64631855-64632024) |
|
6-176, gnl|canFam2|chr37 (27949806-27950410) |
|
6-176, gnl|dasNov1|scaffold_12456 (9921-9374) |
|
6-176, gnl|hg17|chr2 (218962120-218962629) |
|
6-176, gnl|Hg17|chr2 (218962394-218962538) |
|
6-176, gnl|mm7|chr1 (74526000-74526596) |
|
6-176, gnl|Mm7|chr1 (74526333-74526495) |
|
6-176, gnl|oryCun1|scaffold_211393 (82704-83165) |
|
6-176, gnl|panTro1|chr13 (109119341-109119858) |
|
6-176, gnl|rheMac2|chr12 (82092888-82093409) |
|
6-176, gnl|rn3|chr9 (73759883-73760504) |
| |
|
205-828, gnl|bosTau2|chr18 (42249435-42248825) |
|
205-828, gnl|Hg17|chrX (130663304-130662690) |
|
205-828, gnl|Mm7|chr1 (74524744-74527108) |
|
nep (0.36785) |
|
eye (0.341006) |
|
fhi (0.339155) |
|
ecc (0.23007) |
|
mas (0.210305) |
|
fcc (0.197785) |
|
ton (0.1755) |
|
cag (0.151194) |
|
hyp (0.142837) |
|
hlv (0.139256) |
|
che (0.136314) |
|
nmm (0.132802) |
|
cov (0.132153) |
|
eru (0.120048) |
|
ebs (0.118301) |
|
med (0.116252) |
|
jca (0.11396) |
|
cty (0.10408) |
|
eje (0.0988338) |
|
ldo (0.0970026) |
|
nep (0.36785) |
|
eye (0.341006) |
|
fhi (0.339155) |
|
ecc (0.23007) |
|
mas (0.210305) |
|
fcc (0.197785) |
|
ton (0.1755) |
|
cag (0.151194) |
|
hyp (0.142837) |
|
hlv (0.139256) |
|
che (0.136314) |
|
nmm (0.132802) |
|
cov (0.132153) |
|
eru (0.120048) |
|
ebs (0.118301) |
|
med (0.116252) |
|
jca (0.11396) |
|
cty (0.10408) |
|
eje (0.0988338) |
|
ldo (0.0970026) |
