Non-Coding RNA Search

Ss1.1-Pig4-TMW8017I12.3

Sequence:


               
               TTAGTTTCCAGCCTTTGATAGTCTAAATATGCTTCCAAGAAAAGAGCCCTTTGATTTTCA
AGTTATCTTTGGGTTTCTATACCATGGATTAATGATTTTCCCCCATCTTTGCTGATGCGT
ATGTGTAGGCATTTGGAAATTATGGAAAGGCATCTGTCTAACTCATGGATATATATTACC
ACTTGATTCATATCAAGTATTTGCCAAACTGCTTTTTGCAGTCAAAACATTATCTGCAAT
TTGCTCTATGAAAATGTATGCCGGGATCAATAAAAGCAGGCTAGATGTAATTCTTCTGTG
ATCTTAAATGAGAGCAGCGTAGTAATTGAATACAACTGATGCAGTTTATATTCCAAGGTA
CTTTTTTGGTTCTGTACATGTTTTCAAGTGAACTGCCCATGTCCTGAGGTTGCTATCATA
CGATTGATCACACAGGCATTTAGGAGCACGTAACGACACACGAGATTTTATATTTCCACA
GGGAACTGCTTCAGTGTAAGGGCAGGTTTCTCAACACCCTTCTTCCTCACCGAGCCCATC
AGTGAAGTTCAGTGAAATGAATAACATAATTGGTGGTTGGTTCAATCACTACCAGTCTAG
ACTAGCCCAGACGCATCAATTAGAGGGGGCTGTCTTTTAAAGGGAGAGTGCCACCGAAAC
AAGCAGGGCATTATTGATACTGATCTTTAAAAGTGCAAATCCAGCTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAGTTTCCAGCCTTTGATAGTCTAAATATGCTTCCAAGAAAAGAGCCCTTTGATTTTCA
AGTTATCTTTGGGTTTCTATACCATGGATTAATGATTTTCCCCCATCTTTGCTGATGCGT
ATGTGTAGGCATTTGGAAATTATGGAAAGGCATCTGTCTAACTCATGGATATATATTACC
ACTTGATTCATATCAAGTATTTGCCAAACTGCTTTTTGCAGTCAAAACATTATCTGCAAT
TTGCTCTATGAAAATGTATGCCGGGATCAATAAAAGCAGGCTAGATGTAATTCTTCTGTG
ATCTTAAATGAGAGCAGCGTAGTAATTGAATACAACTGATGCAGTTTATATTCCAAGGTA
CTTTTTTGGTTCTGTACATGTTTTCAAGTGAACTGCCCATGTCCTGAGGTTGCTATCATA
CGATTGATCACACAGGCATTTAGGAGCACGTAACGACACACGAGATTTTATATTTCCACA
GGGAACTGCTTCAGTGTAAGGGCAGGTTTCTCAACACCCTTCTTCCTCACCGAGCCCATC
AGTGAAGTTCAGTGAAATGAATAACATAATTGGTGGTTGGTTCAATCACTACCAGTCTAG
ACTAGCCCAGACGCATCAATTAGAGGGGGCTGTCTTTTAAAGGGAGAGTGCCACCGAAAC
AAGCAGGGCATTATTGATACTGATCTTTAAAAGTGCAAATCCAGCTTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-708, gnl|bosTau2|chr15 (20064307-20065021)
               

               
               1-708, gnl|Hg17|chr11 (121474315-121473609)
               

               
               1-708, gnl|Mm7|chr9 (41513894-41514589)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-708, gnl|bosTau2|chr15 (20064307-20065021)
               

               
               1-708, gnl|Hg17|chr11 (121474315-121473609)
               

               
               1-708, gnl|Mm7|chr9 (41513894-41514589)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eru (0.120048)
               

               
               jca (0.11396)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)
               

               
               jca (0.11396)

	1-708, gnl\|bosTau2\|chr15 (20064307-20065021)
	1-708, gnl\|Hg17\|chr11 (121474315-121473609)
	1-708, gnl\|Mm7\|chr9 (41513894-41514589)