Ss1.1-Pig4-TMW8018M10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAGGGACTGCTGCGCGGGAGATCACAGGGAAGGCAGAGACCCGTCGGCCCCGAGATGTC GTACATGCTCCCGCACCTGCACAATGGCTGGCAGGTGGATCAGGCCATGACCCGTCGGCC CCGAGATGTCGTACATGCTCCCGCACCTGCACAATGGCTGGCAGGTGGATCAGGCCATCC TCTCGGAAGAAGACCGCGTGGTGGTAATTCGATTTGGACACGACTGGGATCCTACTTGCA TGAAGATGGACGAGGTTCTGTACAGCATAGCTGAGAAGGTTAAAAATTTTGCAGTTATTT ATCTTGTGGATATCACAGAAGTACCTGACTTCAACAAAATGTATGAATTATATGATCCGT GTACTGTCATGTTTTTCTTCAGGAACAAGCATATCATGATTGACCTGGGTACTGGTAACA ACAACAAGATCAACTGGGCCATGGAGGACAAGCAGGAGATGATCGACATAATTGAGACTG TGTACCGTGGGGCCCGGAAAGGCCGCGGTCTGGTTGTATCCCCGAAGGACTACTCCACAA AGTACAGATACTGAGCTCCTAGCTGGTCCTGGTGCACACAGGTGCCATGGAGTCAGTCCC ACATGGACACAGTCTAAACTCTTGAGAGCATCTGAGGAAGTATGTGTGGCTCAAGGAGCT GGAGGGTTTTACAGTGAGGGTGGCATTGCCTTCACTTTCAGTCTACTTGATCATTGTATT TTTGTATCAGCAAATATCTGTAAATAGCTAAATAAATACAATACCTGGCGACAGGAACAG AAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAGGGACTGCTGCGCGGGAGATCACAGGGAAGGCAGAGACCCGTCGGCCCCGAGATGTC GTACATGCTCCCGCACCTGCACAATGGCTGGCAGGTGGATCAGGCCATGACCCGTCGGCC CCGAGATGTCGTACATGCTCCCGCACCTGCACAATGGCTGGCAGGTGGATCAGGCCATCC TCTCGGAAGAAGACCGCGTGGTGGTAATTCGATTTGGACACGACTGGGATCCTACTTGCA TGAAGATGGACGAGGTTCTGTACAGCATAGCTGAGAAGGTTAAAAATTTTGCAGTTATTT ATCTTGTGGATATCACAGAAGTACCTGACTTCAACAAAATGTATGAATTATATGATCCGT GTACTGTCATGTTTTTCTTCAGGAACAAGCATATCATGATTGACCTGGGTACTGGTAACA ACAACAAGATCAACTGGGCCATGGAGGACAAGCAGGAGATGATCGACATAATTGAGACTG TGTACCGTGGGGCCCGGAAAGGCCGCGGTCTGGTTGTATCCCCGAAGGACTACTCCACAA AGTACAGATACTGAGCTCCTAGCTGGTCCTGGTGCACACAGGTGCCATGGAGTCAGTCCC ACATGGACACAGTCTAAACTCTTGAGAGCATCTGAGGAAGTATGTGTGGCTCAAGGAGCT GGAGGGTTTTACAGTGAGGGTGGCATTGCCTTCACTTTCAGTCTACTTGATCATTGTATT TTTGTATCAGCAAATATCTGTAAATAGCTAAATAAATACAATACCTGGCGACAGGAACAG AAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 109-283, gnl|bosTau2|chr24 (1291447-1291274) | |
| 109-283, gnl|canFam2|chr1 (3722390-3722226) | |
| 109-283, gnl|danRer3|chr19 (23804846-23804691) | |
| 109-283, gnl|dasNov1|scaffold_151418 (4549-4402) | |
| 109-283, gnl|echTel1|scaffold_89574 (428-578) | |
| 109-283, gnl|fr1|chrUn (951645-951484) | |
| 109-283, gnl|galGal2|chr2 (55992790-55992619) | |
| 109-283, gnl|hg17|chr18 (75849225-75849393) | |
| 109-283, gnl|Hg17|chr18 (75849396-75849223) | |
| 109-283, gnl|loxAfr1|scaffold_41394 (273-118) | |
| 109-283, gnl|mm7|chr18 (80493690-80493524) | |
| 109-283, gnl|Mm7|chr18 (80493509-80493691) | |
| 109-283, gnl|monDom2|scaffold_3 (117398668-117398501) | |
| 109-283, gnl|oryCun1|scaffold_72582 (1615-1454) | |
| 109-283, gnl|panTro1|chr17 (73064529-73064698) | |
| 109-283, gnl|rheMac2|chr18 (73251971-73252139) | |
| 109-283, gnl|rn3|chr18 (77179551-77179384) | |
| 109-283, gnl|tetNig1|chr21 (4247547-4247710) | |
| 109-283, gnl|xenTro1|scaffold_185 (1008549-1008710) | |
| 376-764, gnl|bosTau2|chr24 (1281376-1280979) | |
| 376-764, gnl|Hg17|chr18 (75834852-75834517) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 109-283, gnl|bosTau2|chr24 (1291447-1291274) | |
| 109-283, gnl|canFam2|chr1 (3722390-3722226) | |
| 109-283, gnl|danRer3|chr19 (23804846-23804691) | |
| 109-283, gnl|dasNov1|scaffold_151418 (4549-4402) | |
| 109-283, gnl|echTel1|scaffold_89574 (428-578) | |
| 109-283, gnl|fr1|chrUn (951645-951484) | |
| 109-283, gnl|galGal2|chr2 (55992790-55992619) | |
| 109-283, gnl|hg17|chr18 (75849225-75849393) | |
| 109-283, gnl|Hg17|chr18 (75849396-75849223) | |
| 109-283, gnl|loxAfr1|scaffold_41394 (273-118) | |
| 109-283, gnl|mm7|chr18 (80493690-80493524) | |
| 109-283, gnl|Mm7|chr18 (80493509-80493691) | |
| 109-283, gnl|monDom2|scaffold_3 (117398668-117398501) | |
| 109-283, gnl|oryCun1|scaffold_72582 (1615-1454) | |
| 109-283, gnl|panTro1|chr17 (73064529-73064698) | |
| 109-283, gnl|rheMac2|chr18 (73251971-73252139) | |
| 109-283, gnl|rn3|chr18 (77179551-77179384) | |
| 109-283, gnl|tetNig1|chr21 (4247547-4247710) | |
| 109-283, gnl|xenTro1|scaffold_185 (1008549-1008710) | |
| 376-764, gnl|bosTau2|chr24 (1281376-1280979) | |
| 376-764, gnl|Hg17|chr18 (75834852-75834517) |
| Expressed library(ies): 27 entry(ies) | More info |
| Expressed library(ies): 27 entry(ies) | Help | Less info |
| cut (0.509771) | |
| elu (0.385356) | |
| nep (0.36785) | |
| cje (0.330469) | |
| cte (0.29274) | |
| fce (0.271592) | |
| ste (0.270416) | |
| ova (0.258264) | |
| cbe (0.239234) | |
| mas (0.210305) | |
| tes (0.207814) | |
| jej (0.197844) | |
| nlu (0.191681) | |
| fhi (0.169578) | |
| cki (0.165235) | |
| eli (0.151814) | |
| fat (0.147427) | |
| lin (0.145603) | |
| hyp (0.142837) | |
| csk (0.140746) | |
| hlv (0.139256) | |
| sug (0.127291) | |
| thg (0.126791) | |
| bla (0.124347) | |
| eep (0.122564) | |
| ecc (0.115035) | |
| cty (0.10408) |
| Expressed library(ies): 27 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cut (0.509771) | |
| elu (0.385356) | |
| nep (0.36785) | |
| cje (0.330469) | |
| cte (0.29274) | |
| fce (0.271592) | |
| ste (0.270416) | |
| ova (0.258264) | |
| cbe (0.239234) | |
| mas (0.210305) | |
| tes (0.207814) | |
| jej (0.197844) | |
| nlu (0.191681) | |
| fhi (0.169578) | |
| cki (0.165235) | |
| eli (0.151814) | |
| fat (0.147427) | |
| lin (0.145603) | |
| hyp (0.142837) | |
| csk (0.140746) | |
| hlv (0.139256) | |
| sug (0.127291) | |
| thg (0.126791) | |
| bla (0.124347) | |
| eep (0.122564) | |
| ecc (0.115035) | |
| cty (0.10408) |