Ss1.1-Pig4-TMW8018P20.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATTTGAAAGTTCGGGATGTGGAAAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACTC TTTAATACAGAACAAAGGAATGTATACAAAGACTATCGCTTCCTTGAGCTGGCATGTGAT TCACAGGAGGATGTAGACAGCTGGAAGGCATCCCTACTAAGAGCTGGGGTTTATCCTGAT AAGTCTTTAGTAAGTTGGATATGTCTATTTTTTTTAATTATCTCTTATTTTAAAATTTAT TAATAATTGAAATTATTAAGAAAACATAATTCTGCATACTATATGCTGGAGAAACTCATT ATCATTTGACTTAATTAATTCATCATAGTTTTAACCAACACTTTGCTTGTGTTTCTTTTT ATCCACTAGATTTCTGTTTTAAGAAGTTTATCAGTATATTCTCAACTTTGCCATAAAACA TAACATACGTAGTCTCAAAGCAAGAGAGAGTTTCTTTGTTTTAATGTAAAATTTTATTTT CCTTCGTACTCTATTCTACAGTTGTTATAGTATTCATATAAGCAATTAACATTCTTCATA TAGTCATAGCATATATGTCAATCATAACACTATTTCATATTCTTTAAAGTGTACTTTTTT TTTTTTATAAAAAGCTACCTCCTTTCATTATGTCTGTAGAACCAGCATCCAAAATTAAAC TCTGGGTAATGTCATTGTGAGTATAAAAGAACAAAAAAATACTATATTGCTACTCCCACT TATCTTTATTAATATACTTCAAGTATCTTGGAAACACGTCTCTTCATTCGAGTTAATAAA CAGACCTTCTATTTGTGTTCTTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATTTGAAAGTTCGGGATGTGGAAAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACTC TTTAATACAGAACAAAGGAATGTATACAAAGACTATCGCTTCCTTGAGCTGGCATGTGAT TCACAGGAGGATGTAGACAGCTGGAAGGCATCCCTACTAAGAGCTGGGGTTTATCCTGAT AAGTCTTTAGTAAGTTGGATATGTCTATTTTTTTTAATTATCTCTTATTTTAAAATTTAT TAATAATTGAAATTATTAAGAAAACATAATTCTGCATACTATATGCTGGAGAAACTCATT ATCATTTGACTTAATTAATTCATCATAGTTTTAACCAACACTTTGCTTGTGTTTCTTTTT ATCCACTAGATTTCTGTTTTAAGAAGTTTATCAGTATATTCTCAACTTTGCCATAAAACA TAACATACGTAGTCTCAAAGCAAGAGAGAGTTTCTTTGTTTTAATGTAAAATTTTATTTT CCTTCGTACTCTATTCTACAGTTGTTATAGTATTCATATAAGCAATTAACATTCTTCATA TAGTCATAGCATATATGTCAATCATAACACTATTTCATATTCTTTAAAGTGTACTTTTTT TTTTTTATAAAAAGCTACCTCCTTTCATTATGTCTGTAGAACCAGCATCCAAAATTAAAC TCTGGGTAATGTCATTGTGAGTATAAAAGAACAAAAAAATACTATATTGCTACTCCCACT TATCTTTATTAATATACTTCAAGTATCTTGGAAACACGTCTCTTCATTCGAGTTAATAAA CAGACCTTCTATTTGTGTTCTTTG |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 76-217, gnl|bosTau2|chr16 (28485994-28486134) | |
| 76-217, gnl|canFam2|chr7 (29637410-29637289) | |
| 76-217, gnl|danRer3|chr20 (15350314-15350435) | |
| 76-217, gnl|dasNov1|scaffold_75642 (450-346) | |
| 76-217, gnl|echTel1|scaffold_249809 (122-4) | |
| 76-217, gnl|fr1|chrUn (207663606-207663725) | |
| 76-217, gnl|galGal2|chr8 (4495547-4495426) | |
| 76-217, gnl|hg17|chr1 (169009523-169009644) | |
| 76-217, gnl|Hg17|chr1 (169009523-169009664) | |
| 76-217, gnl|loxAfr1|scaffold_2300 (47454-47333) | |
| 76-217, gnl|mm7|chr1 (162045712-162045591) | |
| 76-217, gnl|Mm7|chr1 (162045710-162045570) | |
| 76-217, gnl|monDom2|scaffold_16 (23415853-23415974) | |
| 76-217, gnl|oryCun1|scaffold_160033 (10815-10936) | |
| 76-217, gnl|panTro1|chr1 (151339004-151339125) | |
| 76-217, gnl|rheMac2|chr1 (202003361-202003482) | |
| 76-217, gnl|rn3|chr13 (77792637-77792516) | |
| 76-217, gnl|xenTro1|scaffold_74 (788447-788329) | |
| 220-673, gnl|bosTau2|chr16 (28486120-28486588) | |
| 220-673, gnl|Hg17|chr1 (169009650-169010084) | |
| 220-673, gnl|Mm7|chr1 (162045583-162045168) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 76-217, gnl|bosTau2|chr16 (28485994-28486134) | |
| 76-217, gnl|canFam2|chr7 (29637410-29637289) | |
| 76-217, gnl|danRer3|chr20 (15350314-15350435) | |
| 76-217, gnl|dasNov1|scaffold_75642 (450-346) | |
| 76-217, gnl|echTel1|scaffold_249809 (122-4) | |
| 76-217, gnl|fr1|chrUn (207663606-207663725) | |
| 76-217, gnl|galGal2|chr8 (4495547-4495426) | |
| 76-217, gnl|hg17|chr1 (169009523-169009644) | |
| 76-217, gnl|Hg17|chr1 (169009523-169009664) | |
| 76-217, gnl|loxAfr1|scaffold_2300 (47454-47333) | |
| 76-217, gnl|mm7|chr1 (162045712-162045591) | |
| 76-217, gnl|Mm7|chr1 (162045710-162045570) | |
| 76-217, gnl|monDom2|scaffold_16 (23415853-23415974) | |
| 76-217, gnl|oryCun1|scaffold_160033 (10815-10936) | |
| 76-217, gnl|panTro1|chr1 (151339004-151339125) | |
| 76-217, gnl|rheMac2|chr1 (202003361-202003482) | |
| 76-217, gnl|rn3|chr13 (77792637-77792516) | |
| 76-217, gnl|xenTro1|scaffold_74 (788447-788329) | |
| 220-673, gnl|bosTau2|chr16 (28486120-28486588) | |
| 220-673, gnl|Hg17|chr1 (169009650-169010084) | |
| 220-673, gnl|Mm7|chr1 (162045583-162045168) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| spc (0.113366) |