Ss1.1-Pig4-TMW8019A10.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGGCTCTGCTGTCTGGAGACCAGTGAAAATGCTCTCGGCTGCAAGCCATGTACTGCAG GTGTCCCTGCAGACATCCAAATAGATATTGATGAAGACAGAGAAACAGAAAGAATTTATT CCCTTTTTACTCTCAGTTTACTTAAGCTGCAGAAAATGGAAGAGGCTTGTGGAACTATAG CCGTCTATCAAGGACCACAAAAAGAGCCAGATGACTATTCTAACTTTGTAATCGAGGATT CTGTAACAACCTTTAAGACAATTCAGCAAATAAAAAGCATCATAGAGAAGCTGGATGAAC CTCATGAAAAGTATAGGAAGAAAAGATCGAGTAGTGCAAAATATGGGAGCAAGGAAAATC CAATTGGTGGGAAAACAACTTAAGAGTTTGACCAGTTGATTCAGAAGAACTGGAAAATAT TATTTTTGTCAGAGTTTTTCAATTCATCGTATACTTTGTTCAAAGTATTTAAGAATGAAC ATTGACTTCAATGTCACCTGCATCCACGTTGTATTTAATATTTAATAATCGAAATTAACT GCTTGGGAATCCTGGTATTGACGTATTCCTAGAGAATTTAAAACCCAAGATTCCCTTCAT ATCTTACGTGTTGAAAGCCATGTTTCTGCAACTTCTTTTTAATAGAGTCTTCCTAAAGAA AAGAAGCTTTGTAACAAAAGGAGAAGCCCTTCCATAGCAAGAAACCATCTCTTCTTGTAA CACTCCGTGTTCTGTGGACTTTTCACTACCATTAGTGCCTGCTCTGTACTGCCAACATTG TGTTTTACTAGAAAATCCTAATCCATGACTATTCAGAGCTTTCCATTTAGTTCATCTAGA CTCTCCCTCTTCAAAAAAGAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGGCTCTGCTGTCTGGAGACCAGTGAAAATGCTCTCGGCTGCAAGCCATGTACTGCAG GTGTCCCTGCAGACATCCAAATAGATATTGATGAAGACAGAGAAACAGAAAGAATTTATT CCCTTTTTACTCTCAGTTTACTTAAGCTGCAGAAAATGGAAGAGGCTTGTGGAACTATAG CCGTCTATCAAGGACCACAAAAAGAGCCAGATGACTATTCTAACTTTGTAATCGAGGATT CTGTAACAACCTTTAAGACAATTCAGCAAATAAAAAGCATCATAGAGAAGCTGGATGAAC CTCATGAAAAGTATAGGAAGAAAAGATCGAGTAGTGCAAAATATGGGAGCAAGGAAAATC CAATTGGTGGGAAAACAACTTAAGAGTTTGACCAGTTGATTCAGAAGAACTGGAAAATAT TATTTTTGTCAGAGTTTTTCAATTCATCGTATACTTTGTTCAAAGTATTTAAGAATGAAC ATTGACTTCAATGTCACCTGCATCCACGTTGTATTTAATATTTAATAATCGAAATTAACT GCTTGGGAATCCTGGTATTGACGTATTCCTAGAGAATTTAAAACCCAAGATTCCCTTCAT ATCTTACGTGTTGAAAGCCATGTTTCTGCAACTTCTTTTTAATAGAGTCTTCCTAAAGAA AAGAAGCTTTGTAACAAAAGGAGAAGCCCTTCCATAGCAAGAAACCATCTCTTCTTGTAA CACTCCGTGTTCTGTGGACTTTTCACTACCATTAGTGCCTGCTCTGTACTGCCAACATTG TGTTTTACTAGAAAATCCTAATCCATGACTATTCAGAGCTTTCCATTTAGTTCATCTAGA CTCTCCCTCTTCAAAAAAGAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 59-162, gnl|bosTau2|chr1 (79491359-79491256) | |
| 59-162, gnl|canFam2|chr23 (40558841-40558954) | |
| 59-162, gnl|danRer3|chrNA (194380455-194380342) | |
| 59-162, gnl|dasNov1|scaffold_3933 (54419-54532) | |
| 59-162, gnl|echTel1|scaffold_41983 (1581-1468) | |
| 59-162, gnl|fr1|chrUn (216036992-216036885) | |
| 59-162, gnl|galGal2|chr9 (3410363-3410250) | |
| 59-162, gnl|hg17|chr3 (142810957-142811070) | |
| 59-162, gnl|Hg17|chr3 (142810960-142811063) | |
| 59-162, gnl|loxAfr1|scaffold_11908 (22421-22308) | |
| 59-162, gnl|mm7|chr9 (96186539-96186426) | |
| 59-162, gnl|Mm7|chr9 (96186534-96186431) | |
| 59-162, gnl|monDom2|scaffold_28 (12233029-12233142) | |
| 59-162, gnl|oryCun1|scaffold_177549 (50869-50982) | |
| 59-162, gnl|panTro1|chr2 (145349822-145349936) | |
| 59-162, gnl|rheMac2|chr2 (146236383-146236270) | |
| 59-162, gnl|rn3|chr8 (101640891-101640778) | |
| 59-162, gnl|tetNig1|chr5 (8247508-8247615) | |
| 59-162, gnl|xenTro1|scaffold_108 (195379-195270) | |
| 353-864, gnl|bosTau2|chr1 (79488073-79487572) | |
| 353-864, gnl|Hg17|chr3 (142813823-142814331) | |
| 353-864, gnl|Mm7|chr9 (96184118-96183618) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 59-162, gnl|bosTau2|chr1 (79491359-79491256) | |
| 59-162, gnl|canFam2|chr23 (40558841-40558954) | |
| 59-162, gnl|danRer3|chrNA (194380455-194380342) | |
| 59-162, gnl|dasNov1|scaffold_3933 (54419-54532) | |
| 59-162, gnl|echTel1|scaffold_41983 (1581-1468) | |
| 59-162, gnl|fr1|chrUn (216036992-216036885) | |
| 59-162, gnl|galGal2|chr9 (3410363-3410250) | |
| 59-162, gnl|hg17|chr3 (142810957-142811070) | |
| 59-162, gnl|Hg17|chr3 (142810960-142811063) | |
| 59-162, gnl|loxAfr1|scaffold_11908 (22421-22308) | |
| 59-162, gnl|mm7|chr9 (96186539-96186426) | |
| 59-162, gnl|Mm7|chr9 (96186534-96186431) | |
| 59-162, gnl|monDom2|scaffold_28 (12233029-12233142) | |
| 59-162, gnl|oryCun1|scaffold_177549 (50869-50982) | |
| 59-162, gnl|panTro1|chr2 (145349822-145349936) | |
| 59-162, gnl|rheMac2|chr2 (146236383-146236270) | |
| 59-162, gnl|rn3|chr8 (101640891-101640778) | |
| 59-162, gnl|tetNig1|chr5 (8247508-8247615) | |
| 59-162, gnl|xenTro1|scaffold_108 (195379-195270) | |
| 353-864, gnl|bosTau2|chr1 (79488073-79487572) | |
| 353-864, gnl|Hg17|chr3 (142813823-142814331) | |
| 353-864, gnl|Mm7|chr9 (96184118-96183618) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| sug (0.254582) | |
| tes (0.207814) | |
| rec (0.17307) | |
| spl (0.143184) | |
| thg (0.126791) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sug (0.254582) | |
| tes (0.207814) | |
| rec (0.17307) | |
| spl (0.143184) | |
| thg (0.126791) |