Ss1.1-Pig4-TMW8019E12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCGCGCGGGGGCAGAGATGGCGGAGGAGTGGGAAGGCGATTTTGCGAAGTCATGTGCAC GCCTTGAAGCAGCAGCGACTGCAGACACCTCGGGGTCTCCAGCGGGGACCACCACGGTCG CCGCAGAGTCATCGGAGCGCGAGGGCTACAGTAGAAAGTGCGTGTTCTGCCGGATCGCGG GGCAGCAGGAACCCGGCACGGAACTCCTGTACTGTGAGAATGAAGACCTAGTTTGCTTCA AAGATATCAAACCAGCGGCACCTCATCATTATCTTGTGGCACCAAAGAAGCATATTGTAA ATTGCAACTATTTAAAGAAAGATCAAATAGGGCTGGTTGAGAACATGGTAACTGTTGGAA AAACCATTCTTGAAAGGAATAATTTCACTGACTTCAACAATATTAGAATGGGTTTCCATA TCCCACCGTTTTGTTCCATTTCCCACTTGCACCTTCATGTTTTGGCACCAGTCGATCATC TTAGCTTCTTATCAAGATTGGTTTATAAAGAGAATTCCTATTGGTTTATCACAGCTGATT ATTTGATTGAAAAATTAAGAACATGAAAATGTCAGCAGTGGAAGATTTTTGCAATCTTGG CTCAACATAAACTAATATCTTCGTCTCTATGAAGTCTAATTACAATTGTAAGGTTCATTG GGTTTTATGGGAAGCTATTACTGAGTAGACTTAAATGCATTGTAATGGAATTTTATCTGT AAGACTGTAAATGGGAAAGAAACATAAAGTGGTTATGTTAATGTATTAAAACTGGCAGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCGCGCGGGGGCAGAGATGGCGGAGGAGTGGGAAGGCGATTTTGCGAAGTCATGTGCAC GCCTTGAAGCAGCAGCGACTGCAGACACCTCGGGGTCTCCAGCGGGGACCACCACGGTCG CCGCAGAGTCATCGGAGCGCGAGGGCTACAGTAGAAAGTGCGTGTTCTGCCGGATCGCGG GGCAGCAGGAACCCGGCACGGAACTCCTGTACTGTGAGAATGAAGACCTAGTTTGCTTCA AAGATATCAAACCAGCGGCACCTCATCATTATCTTGTGGCACCAAAGAAGCATATTGTAA ATTGCAACTATTTAAAGAAAGATCAAATAGGGCTGGTTGAGAACATGGTAACTGTTGGAA AAACCATTCTTGAAAGGAATAATTTCACTGACTTCAACAATATTAGAATGGGTTTCCATA TCCCACCGTTTTGTTCCATTTCCCACTTGCACCTTCATGTTTTGGCACCAGTCGATCATC TTAGCTTCTTATCAAGATTGGTTTATAAAGAGAATTCCTATTGGTTTATCACAGCTGATT ATTTGATTGAAAAATTAAGAACATGAAAATGTCAGCAGTGGAAGATTTTTGCAATCTTGG CTCAACATAAACTAATATCTTCGTCTCTATGAAGTCTAATTACAATTGTAAGGTTCATTG GGTTTTATGGGAAGCTATTACTGAGTAGACTTAAATGCATTGTAATGGAATTTTATCTGT AAGACTGTAAATGGGAAAGAAACATAAAGTGGTTATGTTAATGTATTAAAACTGGCAGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 217-349, gnl|bosTau2|chr9 (12787953-12787821) | |
| 217-349, gnl|canFam2|chr1 (67891469-67891597) | |
| 217-349, gnl|danRer3|chr13 (12610504-12610643) | |
| 217-349, gnl|dasNov1|scaffold_1692 (120708-120836) | |
| 217-349, gnl|echTel1|scaffold_311557 (267880-267752) | |
| 217-349, gnl|fr1|chrUn (55504709-55504837) | |
| 217-349, gnl|hg17|chr6 (126329721-126329849) | |
| 217-349, gnl|Hg17|chr6 (126329724-126329856) | |
| 217-349, gnl|loxAfr1|scaffold_96575 (874-1002) | |
| 217-349, gnl|mm7|chr10 (30395481-30395353) | |
| 217-349, gnl|Mm7|chr10 (30395476-30395347) | |
| 217-349, gnl|monDom2|scaffold_0 (87990123-87989995) | |
| 217-349, gnl|panTro1|chr5 (128853969-128854097) | |
| 217-349, gnl|rheMac2|chr4 (137975507-137975379) | |
| 217-349, gnl|rn3|chr1 (27725866-27725994) | |
| 217-349, gnl|tetNig1|chr8 (3308201-3308329) | |
| 217-349, gnl|xenTro1|scaffold_22 (78432-78304) | |
| 505-696, gnl|bosTau2|chr9 (12780439-12780249) | |
| 505-696, gnl|Hg17|chr6 (126340456-126340645) | |
| 505-696, gnl|Mm7|chr10 (30389110-30388909) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 217-349, gnl|bosTau2|chr9 (12787953-12787821) | |
| 217-349, gnl|canFam2|chr1 (67891469-67891597) | |
| 217-349, gnl|danRer3|chr13 (12610504-12610643) | |
| 217-349, gnl|dasNov1|scaffold_1692 (120708-120836) | |
| 217-349, gnl|echTel1|scaffold_311557 (267880-267752) | |
| 217-349, gnl|fr1|chrUn (55504709-55504837) | |
| 217-349, gnl|hg17|chr6 (126329721-126329849) | |
| 217-349, gnl|Hg17|chr6 (126329724-126329856) | |
| 217-349, gnl|loxAfr1|scaffold_96575 (874-1002) | |
| 217-349, gnl|mm7|chr10 (30395481-30395353) | |
| 217-349, gnl|Mm7|chr10 (30395476-30395347) | |
| 217-349, gnl|monDom2|scaffold_0 (87990123-87989995) | |
| 217-349, gnl|panTro1|chr5 (128853969-128854097) | |
| 217-349, gnl|rheMac2|chr4 (137975507-137975379) | |
| 217-349, gnl|rn3|chr1 (27725866-27725994) | |
| 217-349, gnl|tetNig1|chr8 (3308201-3308329) | |
| 217-349, gnl|xenTro1|scaffold_22 (78432-78304) | |
| 505-696, gnl|bosTau2|chr9 (12780439-12780249) | |
| 505-696, gnl|Hg17|chr6 (126340456-126340645) | |
| 505-696, gnl|Mm7|chr10 (30389110-30388909) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| tes (0.831255) | |
| cte (0.58548) | |
| mgm (0.180343) | |
| spc (0.113366) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.831255) | |
| cte (0.58548) | |
| mgm (0.180343) | |
| spc (0.113366) |