Non-Coding RNA Search

Ss1.1-Pig4-TMW8019E21.3

Sequence:


               
               GAACTTATGCAAAGACATGCCAATCTGAGGGTGTGGGTAGGCAAAAAATTCTTAGTTTAG
GGCTTCTATATAACTCTTTCAATTTTTTAAAAAAGTAACATGCTTTAGCTGTTGATAGCA
TACTATTAAAAAAAGAACCATGAAAAGTCAAAGGAGGCCAGGCATGCTTTAAAGAAATAG
ATTAAACTGTTTTTATGATTTAACTCAATACAAGGAAATATCATTTCACTGCCTGTCACT
TCATAACAACTAGAGCCTGTGTTTAAGAAAAGAAAAATGTTTTCTTATGAGAAGGCTGGG
AGACCTTGGACATTATATTATTTCAGGAGGAGATAGCTCCAAGCTTTCTGAACATTTATA
TTTTTATCAATCTTTGTATAATATTATCAAAGAACATATGTTGACCTACAAAATGCTTTC
AGGACTGTTTCCTTAAAAGGACAATAAGTGAGCACAGTCTGTGTAGCCCAGAAATAGTGC
TGTTCTCTCAGAAGATGGCTAGTATTAGGTCAGACCACCCTTTTTCAATGGTCCTGCTCT
CCAGATGTGCCTGTGACTGGAACTTTTTTTTAAGTTCAAGTTTCCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACTTATGCAAAGACATGCCAATCTGAGGGTGTGGGTAGGCAAAAAATTCTTAGTTTAG
GGCTTCTATATAACTCTTTCAATTTTTTAAAAAAGTAACATGCTTTAGCTGTTGATAGCA
TACTATTAAAAAAAGAACCATGAAAAGTCAAAGGAGGCCAGGCATGCTTTAAAGAAATAG
ATTAAACTGTTTTTATGATTTAACTCAATACAAGGAAATATCATTTCACTGCCTGTCACT
TCATAACAACTAGAGCCTGTGTTTAAGAAAAGAAAAATGTTTTCTTATGAGAAGGCTGGG
AGACCTTGGACATTATATTATTTCAGGAGGAGATAGCTCCAAGCTTTCTGAACATTTATA
TTTTTATCAATCTTTGTATAATATTATCAAAGAACATATGTTGACCTACAAAATGCTTTC
AGGACTGTTTCCTTAAAAGGACAATAAGTGAGCACAGTCTGTGTAGCCCAGAAATAGTGC
TGTTCTCTCAGAAGATGGCTAGTATTAGGTCAGACCACCCTTTTTCAATGGTCCTGCTCT
CCAGATGTGCCTGTGACTGGAACTTTTTTTTAAGTTCAAGTTTCCAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-588, gnl|bosTau2|chr14 (45449381-45448786)
               

               
               1-588, gnl|Hg17|chr8 (93141808-93141233)
               

               
               1-588, gnl|Mm7|chr4 (13714522-13715187)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-588, gnl|bosTau2|chr14 (45449381-45448786)
               

               
               1-588, gnl|Hg17|chr8 (93141808-93141233)
               

               
               1-588, gnl|Mm7|chr4 (13714522-13715187)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               isp (0.150376)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               isp (0.150376)

	1-588, gnl\|bosTau2\|chr14 (45449381-45448786)
	1-588, gnl\|Hg17\|chr8 (93141808-93141233)
	1-588, gnl\|Mm7\|chr4 (13714522-13715187)