Ss1.1-Pig4-TMW8019N14.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACTTTGCAGATTGAGTCAGATGATTTTGTTATCTGCCAAAAGCCCATGGAACTTCTTGG TGAAAAAAGTGAACAGTCTGGAATATCTGTTACACTAGAGTCAACAGGATTAGCTGATGA GAAAATAAAATATTTCCATGTTCAGCACCTGCTTTATAGACGTTTTGCTCCTGATATTTC ATCCTATGTTTTGTCTGATGACATCAAGTTACATTCACTTCAGCTGCTGCCCATTTACCA GACAGGGTCTCTTACTTCTGATACAAAAAGTTCATCTCAGGAAAAAGAGTTGCTGAGTCT CTTTTGTTTTTTCTCATTACCTCATGTGGGCTATCTGTACATGGTTGTCAAATCTGTTGA ATTAATGTCAGTCTACCAATATCCCGAGAAGTCTCAGCAGGCGGTGCTCACACCACAGTT TTTGCATGTCATCACAAGTAACTACCTGCAGTGTTACACAGTGCGGTGCAGTGCAGCGGC TGCTCGTGAGGAGGACCCGTACGTGGACACAACCCTGAAGGCTTGCCCACCTGTCAGTAT GGATGTCTGTGCTTTAAGAATACAACTTTTCATAGGCTTGAAAGCCATCTGTCACTTTAA AAACCACGTCATACTTCTGACTAAGGCAGACCCTGAAACCATTCCAGAGAGGAAAGAGTC ACCCAAGAGGCTTGGTTCTAAAAAAGTTACCAGTGTTACCCTCAGAACACCTCCTGTAGC TGAGGCTGGGTGGAATTTGTATATTGTGAATACGATCTCATCAGTGCAACTGTACAAAGA AATGGTAGACTACAGTAATACCTATAAGACTGCGAAAACCCAGAGCTGCATCCACCTCCT CAGCGAGGCTCACCTGTTAGTGAGAGCTGCCCTCATGGAAGCCTGTCAGCTGGAACCTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACTTTGCAGATTGAGTCAGATGATTTTGTTATCTGCCAAAAGCCCATGGAACTTCTTGG TGAAAAAAGTGAACAGTCTGGAATATCTGTTACACTAGAGTCAACAGGATTAGCTGATGA GAAAATAAAATATTTCCATGTTCAGCACCTGCTTTATAGACGTTTTGCTCCTGATATTTC ATCCTATGTTTTGTCTGATGACATCAAGTTACATTCACTTCAGCTGCTGCCCATTTACCA GACAGGGTCTCTTACTTCTGATACAAAAAGTTCATCTCAGGAAAAAGAGTTGCTGAGTCT CTTTTGTTTTTTCTCATTACCTCATGTGGGCTATCTGTACATGGTTGTCAAATCTGTTGA ATTAATGTCAGTCTACCAATATCCCGAGAAGTCTCAGCAGGCGGTGCTCACACCACAGTT TTTGCATGTCATCACAAGTAACTACCTGCAGTGTTACACAGTGCGGTGCAGTGCAGCGGC TGCTCGTGAGGAGGACCCGTACGTGGACACAACCCTGAAGGCTTGCCCACCTGTCAGTAT GGATGTCTGTGCTTTAAGAATACAACTTTTCATAGGCTTGAAAGCCATCTGTCACTTTAA AAACCACGTCATACTTCTGACTAAGGCAGACCCTGAAACCATTCCAGAGAGGAAAGAGTC ACCCAAGAGGCTTGGTTCTAAAAAAGTTACCAGTGTTACCCTCAGAACACCTCCTGTAGC TGAGGCTGGGTGGAATTTGTATATTGTGAATACGATCTCATCAGTGCAACTGTACAAAGA AATGGTAGACTACAGTAATACCTATAAGACTGCGAAAACCCAGAGCTGCATCCACCTCCT CAGCGAGGCTCACCTGTTAGTGAGAGCTGCCCTCATGGAAGCCTGTCAGCTGGAACCTGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
| 1-159, gnl|bosTau2|chr1 (75984664-75984822) | |
| 1-159, gnl|canFam2|chr23 (47002983-47003180) | |
| 1-159, gnl|dasNov1|scaffold_4999 (1982-2180) | |
| 1-159, gnl|echTel1|scaffold_290256 (147190-146986) | |
| 1-159, gnl|galGal2|chr9 (23363046-23362834) | |
| 1-159, gnl|hg17|chr3 (150341479-150341677) | |
| 1-159, gnl|Hg17|chr3 (150341515-150341673) | |
| 1-159, gnl|loxAfr1|scaffold_28965 (50344-50547) | |
| 1-159, gnl|mm7|chr3 (19761360-19761163) | |
| 1-159, gnl|Mm7|chr3 (19761323-19761165) | |
| 1-159, gnl|monDom2|scaffold_28 (20741772-20741980) | |
| 1-159, gnl|oryCun1|scaffold_178564 (876-678) | |
| 1-159, gnl|panTro1|chr2 (153374255-153374453) | |
| 1-159, gnl|rheMac2|chr2 (138656005-138655807) | |
| 1-159, gnl|rn3|chr2 (105117011-105116814) | |
| 1-159, gnl|xenTro1|scaffold_275 (358338-358168) | |
| 234-438, gnl|bosTau2|chr1 (75988405-75988609) | |
| 234-438, gnl|Hg17|chr3 (150345827-150346031) | |
| 234-438, gnl|Mm7|chr3 (19757950-19757749) | |
| 519-673, gnl|bosTau2|chr1 (75994146-75994300) | |
| 519-673, gnl|canFam2|chr23 (47013873-47014054) | |
| 519-673, gnl|danRer3|chr22 (48519842-48519655) | |
| 519-673, gnl|dasNov1|scaffold_4999 (14759-14942) | |
| 519-673, gnl|echTel1|scaffold_319066 (8645-8830) | |
| 519-673, gnl|galGal2|chr9 (23356644-23356469) | |
| 519-673, gnl|hg17|chr3 (150353960-150354142) | |
| 519-673, gnl|Hg17|chr3 (150353977-150354131) | |
| 519-673, gnl|loxAfr1|scaffold_20027 (1584-1402) | |
| 519-673, gnl|mm7|chr3 (19751997-19751814) | |
| 519-673, gnl|Mm7|chr3 (19751977-19751823) | |
| 519-673, gnl|monDom2|scaffold_28 (20748998-20749181) | |
| 519-673, gnl|oryCun1|scaffold_173242 (55304-55121) | |
| 519-673, gnl|panTro1|chr2 (153386707-153386889) | |
| 519-673, gnl|rheMac2|chr2 (138642253-138642071) | |
| 519-673, gnl|xenTro1|scaffold_275 (354589-354430) | |
| 784-900, gnl|bosTau2|chr1 (75999654-75999770) | |
| 784-900, gnl|canFam2|chr23 (47018628-47018774) | |
| 784-900, gnl|danRer3|chr22 (48515079-48514933) | |
| 784-900, gnl|dasNov1|scaffold_4999 (18658-18803) | |
| 784-900, gnl|fr1|chrUn (292980333-292980513) | |
| 784-900, gnl|galGal2|chr9 (23354969-23354824) | |
| 784-900, gnl|hg17|chr3 (150357816-150357960) | |
| 784-900, gnl|Hg17|chr3 (150357834-150357950) | |
| 784-900, gnl|loxAfr1|scaffold_6851 (50211-50359) | |
| 784-900, gnl|mm7|chr3 (19748046-19747902) | |
| 784-900, gnl|Mm7|chr3 (19748026-19747910) | |
| 784-900, gnl|monDom2|scaffold_28 (20758882-20759026) | |
| 784-900, gnl|oryCun1|scaffold_173242 (50010-49869) | |
| 784-900, gnl|panTro1|chr2 (153390569-153390713) | |
| 784-900, gnl|rheMac2|chr2 (138638460-138638315) | |
| 784-900, gnl|rn3|chr2 (105100444-105100300) | |
| 784-900, gnl|xenTro1|scaffold_275 (353097-352951) |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-159, gnl|bosTau2|chr1 (75984664-75984822) | |
| 1-159, gnl|canFam2|chr23 (47002983-47003180) | |
| 1-159, gnl|dasNov1|scaffold_4999 (1982-2180) | |
| 1-159, gnl|echTel1|scaffold_290256 (147190-146986) | |
| 1-159, gnl|galGal2|chr9 (23363046-23362834) | |
| 1-159, gnl|hg17|chr3 (150341479-150341677) | |
| 1-159, gnl|Hg17|chr3 (150341515-150341673) | |
| 1-159, gnl|loxAfr1|scaffold_28965 (50344-50547) | |
| 1-159, gnl|mm7|chr3 (19761360-19761163) | |
| 1-159, gnl|Mm7|chr3 (19761323-19761165) | |
| 1-159, gnl|monDom2|scaffold_28 (20741772-20741980) | |
| 1-159, gnl|oryCun1|scaffold_178564 (876-678) | |
| 1-159, gnl|panTro1|chr2 (153374255-153374453) | |
| 1-159, gnl|rheMac2|chr2 (138656005-138655807) | |
| 1-159, gnl|rn3|chr2 (105117011-105116814) | |
| 1-159, gnl|xenTro1|scaffold_275 (358338-358168) | |
| 234-438, gnl|bosTau2|chr1 (75988405-75988609) | |
| 234-438, gnl|Hg17|chr3 (150345827-150346031) | |
| 234-438, gnl|Mm7|chr3 (19757950-19757749) | |
| 519-673, gnl|bosTau2|chr1 (75994146-75994300) | |
| 519-673, gnl|canFam2|chr23 (47013873-47014054) | |
| 519-673, gnl|danRer3|chr22 (48519842-48519655) | |
| 519-673, gnl|dasNov1|scaffold_4999 (14759-14942) | |
| 519-673, gnl|echTel1|scaffold_319066 (8645-8830) | |
| 519-673, gnl|galGal2|chr9 (23356644-23356469) | |
| 519-673, gnl|hg17|chr3 (150353960-150354142) | |
| 519-673, gnl|Hg17|chr3 (150353977-150354131) | |
| 519-673, gnl|loxAfr1|scaffold_20027 (1584-1402) | |
| 519-673, gnl|mm7|chr3 (19751997-19751814) | |
| 519-673, gnl|Mm7|chr3 (19751977-19751823) | |
| 519-673, gnl|monDom2|scaffold_28 (20748998-20749181) | |
| 519-673, gnl|oryCun1|scaffold_173242 (55304-55121) | |
| 519-673, gnl|panTro1|chr2 (153386707-153386889) | |
| 519-673, gnl|rheMac2|chr2 (138642253-138642071) | |
| 519-673, gnl|xenTro1|scaffold_275 (354589-354430) | |
| 784-900, gnl|bosTau2|chr1 (75999654-75999770) | |
| 784-900, gnl|canFam2|chr23 (47018628-47018774) | |
| 784-900, gnl|danRer3|chr22 (48515079-48514933) | |
| 784-900, gnl|dasNov1|scaffold_4999 (18658-18803) | |
| 784-900, gnl|fr1|chrUn (292980333-292980513) | |
| 784-900, gnl|galGal2|chr9 (23354969-23354824) | |
| 784-900, gnl|hg17|chr3 (150357816-150357960) | |
| 784-900, gnl|Hg17|chr3 (150357834-150357950) | |
| 784-900, gnl|loxAfr1|scaffold_6851 (50211-50359) | |
| 784-900, gnl|mm7|chr3 (19748046-19747902) | |
| 784-900, gnl|Mm7|chr3 (19748026-19747910) | |
| 784-900, gnl|monDom2|scaffold_28 (20758882-20759026) | |
| 784-900, gnl|oryCun1|scaffold_173242 (50010-49869) | |
| 784-900, gnl|panTro1|chr2 (153390569-153390713) | |
| 784-900, gnl|rheMac2|chr2 (138638460-138638315) | |
| 784-900, gnl|rn3|chr2 (105100444-105100300) | |
| 784-900, gnl|xenTro1|scaffold_275 (353097-352951) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cly (0.120642) | |
| cty (0.10408) |