Non-Coding RNA Search

Ss1.1-Pig4-TMW8020H05.5

Sequence:


               
               AAGTAACAGGAAATGAAAGATGAAAGGCAGGTATATTTTGCCCCTCAAAAGAATGTATAA
CCTAAAAGGGTTGGTTGGTCATTGAGTTGTGGTCACATTGCATAGTTCACATCCCAAGAA
AGCGATGTTAGCTAGTTTAGGTTTAGTCGACTGGTGTGGATATTCACACCTGGAAAATGG
TGAAATCTTTCCAAATGTAGTTGAGAAGCCATTTTTCCCTTCCACTGCTTGAGGGTCAAA
CCTGCCGGTCTTACGCAGGTAACACAGGACCTCGCCATCATCCCGTCTAAGCTGCAGCAT
CGCAGACAGTGGCTCACGTGCAACCCCGCTTCTTTTCCAGAGCATAGGAAGCTTGGGAAC
ATGACTGTGACCGTGAAGAAGACTGTCCCCTCTCCTGAGGCCGTGCAGATTCTCTACCAG
CGGATGAGATACGAGTACGAGTTCTACCACTACGTCAAGGAGCAGTTCCACCTGCTGAAG
CGCAAGTTCGGACTCAAGTCTCGTGCCAGCCACCCCCCGCTGAGACCCCAGTTCTTTATT
CCATCGCCACTGGAAACCGAGGAGCCGATCGACGATGAGGAACAGGACGACGAGAAGTGG
CTTGAAGATATTTATAAGAGGTGATGCCGGCACTGTGTTGCCTCCAGTGGCTTAATCTCC
CTTTTCCAGAAAGGTTTTGTTTGGGGAAGAAAAATCCTTCAAGGGACTAAATTAATGCTC
GGCTGCATTAAGAAGAACAAAACATTCCCACATGTTGGGGTCATTGGGAGATGCCCGGTT
TTGCGGGTTTTATTTGTTTAATTTTATTCTGTGTCTTTCTGGCTTCTTGGTCCTTCCCAG
GTACACTAGATGGCTGCCTCACAAGGCATCACGTCATCAAATCACTTTTCTTCCCCTAGC
ATCATGAGAGGAGGAGAAATAGAGCCTAGAGCCCAGTAACTAATCATTGGTAAAAAGACT
TGTAAAAAATATTACCTCGGTGGTAAGAAACACCCATGCTTGTATTTTTCAGTAGAAACC
CCAAACCACTTCAGAGACCAGAGAATCTATTCTAGAAGGATCTAAGAGGAGAAGGCAAGG
CAGACAAGGACATCGAAATGGAGAATGTCCCTGGAGAAGTGGATTCTGCCCATGGGGACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTAACAGGAAATGAAAGATGAAAGGCAGGTATATTTTGCCCCTCAAAAGAATGTATAA
CCTAAAAGGGTTGGTTGGTCATTGAGTTGTGGTCACATTGCATAGTTCACATCCCAAGAA
AGCGATGTTAGCTAGTTTAGGTTTAGTCGACTGGTGTGGATATTCACACCTGGAAAATGG
TGAAATCTTTCCAAATGTAGTTGAGAAGCCATTTTTCCCTTCCACTGCTTGAGGGTCAAA
CCTGCCGGTCTTACGCAGGTAACACAGGACCTCGCCATCATCCCGTCTAAGCTGCAGCAT
CGCAGACAGTGGCTCACGTGCAACCCCGCTTCTTTTCCAGAGCATAGGAAGCTTGGGAAC
ATGACTGTGACCGTGAAGAAGACTGTCCCCTCTCCTGAGGCCGTGCAGATTCTCTACCAG
CGGATGAGATACGAGTACGAGTTCTACCACTACGTCAAGGAGCAGTTCCACCTGCTGAAG
CGCAAGTTCGGACTCAAGTCTCGTGCCAGCCACCCCCCGCTGAGACCCCAGTTCTTTATT
CCATCGCCACTGGAAACCGAGGAGCCGATCGACGATGAGGAACAGGACGACGAGAAGTGG
CTTGAAGATATTTATAAGAGGTGATGCCGGCACTGTGTTGCCTCCAGTGGCTTAATCTCC
CTTTTCCAGAAAGGTTTTGTTTGGGGAAGAAAAATCCTTCAAGGGACTAAATTAATGCTC
GGCTGCATTAAGAAGAACAAAACATTCCCACATGTTGGGGTCATTGGGAGATGCCCGGTT
TTGCGGGTTTTATTTGTTTAATTTTATTCTGTGTCTTTCTGGCTTCTTGGTCCTTCCCAG
GTACACTAGATGGCTGCCTCACAAGGCATCACGTCATCAAATCACTTTTCTTCCCCTAGC
ATCATGAGAGGAGGAGAAATAGAGCCTAGAGCCCAGTAACTAATCATTGGTAAAAAGACT
TGTAAAAAATATTACCTCGGTGGTAAGAAACACCCATGCTTGTATTTTTCAGTAGAAACC
CCAAACCACTTCAGAGACCAGAGAATCTATTCTAGAAGGATCTAAGAGGAGAAGGCAAGG
CAGACAAGGACATCGAAATGGAGAATGTCCCTGGAGAAGTGGATTCTGCCCATGGGGACA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-683, gnl|bosTau2|chr9 (51707335-51708025)
               

               
               1-683, gnl|Hg17|chr6 (149436307-149436991)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-683, gnl|bosTau2|chr9 (51707335-51708025)
               

               
               1-683, gnl|Hg17|chr6 (149436307-149436991)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-683, gnl\|bosTau2\|chr9 (51707335-51708025)
	1-683, gnl\|Hg17\|chr6 (149436307-149436991)