Ss1.1-Pig4-TMW8020L02.5
|
TGCCAAACGGCACTTTGAAGATCATAGACAGGAAAAAGCACATCTTCAAATTGGCACAGG
GAGAGTACATCGCTCCGGAAAAGATCGAAAACATCTACCTGCGAAGTGAGCCTGTGGCTC
AGGTGTTTGTCCACGGAGAGAGCTTGCAGGCATTTCTCATAGCGATTGTGGTTCCAGACG
TTGAGACGCTAGGCCACTGGGCCCAGAAGAGAGGCTTTGTAGGCTCCTTTGAAGAACTGT
GCAGAAACAAGGATGTCAAAAAAGCTATTCTTGAAGACATGCTGAGACTGGGGAGGGACG
CTGGCCTCAAATCATTTGAACAGGTCAGAGGTATTAGTCTTCACCCTGAATTATTCTCCA
TCGACAACGGCCTTCTGACCCCGACAATGAAGGCTAAAAGGCCAGAGCTTCGGAATTATT
TCAGGTCACAGATCGATGAACTTTATTCCACCGTCAAAGTCTAATGTGGGGAAGGAAGGT
GGGAGAAACCGCCTCCGCGGTCCCCTTCCGCCAATGGCCTTCACGGGGTGGTTTCGACGG
CAGCAAGTATAGGGAAGAAGCACCTTGTCTGCCTCGCTCATTCAGATTTGATTCTCGTCA
TAGGAACAGGAGAGGGCATGGAGCACGGCCTTACGGTCACCTCACGTCGCAGACCGTGTT
CACGGTGATACACAATTTCCAAAATGAGCCTTAAAAAATTGTTAAGGGGAAACTATCAAT
GTGCTAAGTTATTTACAACTTCCTCAGTTATAAAAGGTGGGTGAAAACGTCTGTCTCCCT
GTTTTGCTAACCAAGGAGTTAAGACTTTGCTATTTCTGAGACGTCTGCTGCTTGCTGCAA
ATTCTGCAGCTGTCTGCTGCTCTGGAGAGTACCGTGCACTGGAGGGAACCGTCCCGGCTG
AAGGATGTCGCAAATGGACCAGAGGGTTTTTTTAACATCCCTGCTGCCCCCCACCTTCCC
CATTTCACACTCGCTCCTACAACCCTCTGATTGACCCCTGTCGTTCCCGTCGGATCAGAA
GGTTGCCAGTGAAGCAAAGGGCAGACCCAACTCAGCACAGACAGCTACCACTGGAGTCGG
TGGATCCTGGCACCCACAGAGCAGAATATTCTCTGATCCTCTCCTCCAGACCCAATTCCC
TCCATCCTTTCCCAAGGGTTATTGAAAAATCTGCCTTAGACTCTGCAGTGAAGACGAGCA
TTTCAAGAAGGAAATAATTACCTGGATCAACCGTGTTCAACTGTGACGCCTAAATAACTG
TCCACGTAACCTTTGCTGAACCAGTCGCTCTGTCTGACGGCCATGGATCTTTAATGTGGT
TTTCATATCAAAAGAGTATGTTGTGATTAAGTGGCTTCCCCCCCACCCCCCAGAATAAAC
TCTCAGGCAAGGCATGTCTTTAAAAATATTAAGGGAATAGATACACTTGGGTACTTATTG
AAACGGACAGTGATAAATGCTCTTCTATCATAATGCTACCTGATTTCTATGAAATGTATT
TGACAAGCCAAAATTCTAGGACATAGGAATCTGAAAAACTCATTTCCTAGGGTTAATTTC
TCAAGGTTTTTTTTTTTTAAGTTAATTTGGGAAATTAGCAGCATTTCACTTAACTGCAAG
TCTTTGCCACCTGTGACTGAATTTAGTTGTCATTTATACGTTGAAAGCCGTTGTTTTTAG
ACACGTAAATACATGTATTATACAAGCACACCAGGGTTTGCACTAAAGAATCATCATTGT
AATAACACTATTTGGTAGCCTAACTTCATACATGTATTCTTAATTGCACAAAAAGTCAAT
AATTTGTCACCTTGGGGTTTTGAATGTTTGCTTTAAGTGTTGGCTATTTCTATGTTTTAT
AAACCAAAACAGAATTTCCAAAAACAATGAAGGAAACCAAAATAAATATTTCTGCATTTC
AAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGCCAAACGGCACTTTGAAGATCATAGACAGGAAAAAGCACATCTTCAAATTGGCACAGG
GAGAGTACATCGCTCCGGAAAAGATCGAAAACATCTACCTGCGAAGTGAGCCTGTGGCTC
AGGTGTTTGTCCACGGAGAGAGCTTGCAGGCATTTCTCATAGCGATTGTGGTTCCAGACG
TTGAGACGCTAGGCCACTGGGCCCAGAAGAGAGGCTTTGTAGGCTCCTTTGAAGAACTGT
GCAGAAACAAGGATGTCAAAAAAGCTATTCTTGAAGACATGCTGAGACTGGGGAGGGACG
CTGGCCTCAAATCATTTGAACAGGTCAGAGGTATTAGTCTTCACCCTGAATTATTCTCCA
TCGACAACGGCCTTCTGACCCCGACAATGAAGGCTAAAAGGCCAGAGCTTCGGAATTATT
TCAGGTCACAGATCGATGAACTTTATTCCACCGTCAAAGTCTAATGTGGGGAAGGAAGGT
GGGAGAAACCGCCTCCGCGGTCCCCTTCCGCCAATGGCCTTCACGGGGTGGTTTCGACGG
CAGCAAGTATAGGGAAGAAGCACCTTGTCTGCCTCGCTCATTCAGATTTGATTCTCGTCA
TAGGAACAGGAGAGGGCATGGAGCACGGCCTTACGGTCACCTCACGTCGCAGACCGTGTT
CACGGTGATACACAATTTCCAAAATGAGCCTTAAAAAATTGTTAAGGGGAAACTATCAAT
GTGCTAAGTTATTTACAACTTCCTCAGTTATAAAAGGTGGGTGAAAACGTCTGTCTCCCT
GTTTTGCTAACCAAGGAGTTAAGACTTTGCTATTTCTGAGACGTCTGCTGCTTGCTGCAA
ATTCTGCAGCTGTCTGCTGCTCTGGAGAGTACCGTGCACTGGAGGGAACCGTCCCGGCTG
AAGGATGTCGCAAATGGACCAGAGGGTTTTTTTAACATCCCTGCTGCCCCCCACCTTCCC
CATTTCACACTCGCTCCTACAACCCTCTGATTGACCCCTGTCGTTCCCGTCGGATCAGAA
GGTTGCCAGTGAAGCAAAGGGCAGACCCAACTCAGCACAGACAGCTACCACTGGAGTCGG
TGGATCCTGGCACCCACAGAGCAGAATATTCTCTGATCCTCTCCTCCAGACCCAATTCCC
TCCATCCTTTCCCAAGGGTTATTGAAAAATCTGCCTTAGACTCTGCAGTGAAGACGAGCA
TTTCAAGAAGGAAATAATTACCTGGATCAACCGTGTTCAACTGTGACGCCTAAATAACTG
TCCACGTAACCTTTGCTGAACCAGTCGCTCTGTCTGACGGCCATGGATCTTTAATGTGGT
TTTCATATCAAAAGAGTATGTTGTGATTAAGTGGCTTCCCCCCCACCCCCCAGAATAAAC
TCTCAGGCAAGGCATGTCTTTAAAAATATTAAGGGAATAGATACACTTGGGTACTTATTG
AAACGGACAGTGATAAATGCTCTTCTATCATAATGCTACCTGATTTCTATGAAATGTATT
TGACAAGCCAAAATTCTAGGACATAGGAATCTGAAAAACTCATTTCCTAGGGTTAATTTC
TCAAGGTTTTTTTTTTTTAAGTTAATTTGGGAAATTAGCAGCATTTCACTTAACTGCAAG
TCTTTGCCACCTGTGACTGAATTTAGTTGTCATTTATACGTTGAAAGCCGTTGTTTTTAG
ACACGTAAATACATGTATTATACAAGCACACCAGGGTTTGCACTAAAGAATCATCATTGT
AATAACACTATTTGGTAGCCTAACTTCATACATGTATTCTTAATTGCACAAAAAGTCAAT
AATTTGTCACCTTGGGGTTTTGAATGTTTGCTTTAAGTGTTGGCTATTTCTATGTTTTAT
AAACCAAAACAGAATTTCCAAAAACAATGAAGGAAACCAAAATAAATATTTCTGCATTTC
AAAAAAAAAAAAAAAAAAAAAAAA
|
|
gi|21755528|dbj|BAC04704.1| |
Protein identifier
|
gi|21755528|dbj|BAC04704.1| |
|
6-153, gnl|bosTau2|chr27 (10112089-10111942) |
|
6-153, gnl|Hg17|chr4 (186056803-186056656) |
|
6-153, gnl|Mm7|chr8 (45309657-45309804) |
| |
|
320-478, gnl|bosTau2|chr27 (10109525-10109367) |
|
320-478, gnl|Hg17|chr4 (186053572-186053414) |
|
320-478, gnl|Mm7|chr8 (45312205-45312363) |
| |
|
551-1059, gnl|bosTau2|chr27 (10109340-10108813) |
|
551-1059, gnl|Hg17|chr4 (186053332-186052779) |
|
551-1059, gnl|Mm7|chr8 (45312442-45312998) |
| |
|
1060-1922, gnl|bosTau2|chr27 (10108789-10107888) |
|
1060-1922, gnl|Hg17|chr4 (186052755-186051902) |
|
1060-1922, gnl|Mm7|chr8 (45313021-45313911) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
6-153, gnl|bosTau2|chr27 (10112089-10111942) |
|
6-153, gnl|Hg17|chr4 (186056803-186056656) |
|
6-153, gnl|Mm7|chr8 (45309657-45309804) |
| |
|
320-478, gnl|bosTau2|chr27 (10109525-10109367) |
|
320-478, gnl|Hg17|chr4 (186053572-186053414) |
|
320-478, gnl|Mm7|chr8 (45312205-45312363) |
| |
|
551-1059, gnl|bosTau2|chr27 (10109340-10108813) |
|
551-1059, gnl|Hg17|chr4 (186053332-186052779) |
|
551-1059, gnl|Mm7|chr8 (45312442-45312998) |
| |
|
1060-1922, gnl|bosTau2|chr27 (10108789-10107888) |
|
1060-1922, gnl|Hg17|chr4 (186052755-186051902) |
|
1060-1922, gnl|Mm7|chr8 (45313021-45313911) |
|
kid (3.11365) |
|
lun (3.00978) |
|
fat (2.06398) |
|
isp (1.50376) |
|
vin (0.997672) |
|
ste (0.946458) |
|
bfe (0.899146) |
|
tbr (0.770891) |
|
hlv (0.557025) |
|
ldo (0.485013) |
|
nms (0.427716) |
|
hea (0.408998) |
|
ssp (0.406559) |
|
fbs (0.350693) |
|
cki (0.330469) |
|
cli (0.305623) |
|
ski (0.29347) |
|
spl (0.286369) |
|
csk (0.281492) |
|
ret (0.257467) |
|
mgp (0.230681) |
|
ece (0.229305) |
|
nep (0.183925) |
|
duo (0.172801) |
|
lin (0.145603) |
|
pty (0.142714) |
|
che (0.136314) |
|
lyg (0.133103) |
|
nmm (0.132802) |
|
cov (0.132153) |
|
sug (0.127291) |
|
bla (0.124347) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
cbl (0.114797) |
|
cty (0.10408) |
|
nbm (0.0993246) |
|
kid (3.11365) |
|
lun (3.00978) |
|
fat (2.06398) |
|
isp (1.50376) |
|
vin (0.997672) |
|
ste (0.946458) |
|
bfe (0.899146) |
|
tbr (0.770891) |
|
hlv (0.557025) |
|
ldo (0.485013) |
|
nms (0.427716) |
|
hea (0.408998) |
|
ssp (0.406559) |
|
fbs (0.350693) |
|
cki (0.330469) |
|
cli (0.305623) |
|
ski (0.29347) |
|
spl (0.286369) |
|
csk (0.281492) |
|
ret (0.257467) |
|
mgp (0.230681) |
|
ece (0.229305) |
|
nep (0.183925) |
|
duo (0.172801) |
|
lin (0.145603) |
|
pty (0.142714) |
|
che (0.136314) |
|
lyg (0.133103) |
|
nmm (0.132802) |
|
cov (0.132153) |
|
sug (0.127291) |
|
bla (0.124347) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
cbl (0.114797) |
|
cty (0.10408) |
|
nbm (0.0993246) |
