Non-Coding RNA Search

Ss1.1-Pig4-TMW8021B22.3

Sequence:


               
               ATAAAGCAAGAAGCATTTAAAGATATGTATGATCTGCGTCATCTCTACCTCACGGATAAC
AACTTGGACCACATCCCTCTGCCTCTTCCAGAAAATCTACGGGCCCTTCACCTCCAGAAT
AACAACATTCTGGAGATGCATGAAGATACCTTCTGCAATGTTAAAAATTTGACTTATATT
CGTAAGGCACTAGAGGATATCCGACTGGATGGAAACCCTATCAATCTCAGCAAAACTCCT
CAAGCATATATGTGCCTACCTCGTTTGCCTGTTGGGAGCCTTGTCTAATTTCAGATGATG
GTTAGCATTAGGATGCTTCCTATAACAAAACAATTCTTATTGTTCTCTTCAAAAAGAAAA
CTCAGCATGATACTTTCAAAATGTGTTCTGAAAGATGATATAATTACATAAAATACAGCT
AAAAGTTTTAACAGAATACCAGTTTAGTATCATTAAAAAAACACCCAATAAATCAAGAAT
AAACTAAAAGATATACAGAAGAGCAAAACTAAAAGACAGAAAATATTTCACAGATATTTC
TTATAAATCACATGTAATATGCAAGTTTTAGAGATTCACAGCTTATATAATATTAAATTA
ATCATATAATAAAAATTAAAAATTAACACCTTTAGGTATATTGCCAAGATTTAGTTGTTT
TAAATAAACTTTTCAATTCTTTTCTTTTCACTAAAGCATGTTTCTGTTTTTAAATTCCTT
AAGGAAAATGAAGAAATGAATAAAAATACTTGAAAATTAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAAAGCAAGAAGCATTTAAAGATATGTATGATCTGCGTCATCTCTACCTCACGGATAAC
AACTTGGACCACATCCCTCTGCCTCTTCCAGAAAATCTACGGGCCCTTCACCTCCAGAAT
AACAACATTCTGGAGATGCATGAAGATACCTTCTGCAATGTTAAAAATTTGACTTATATT
CGTAAGGCACTAGAGGATATCCGACTGGATGGAAACCCTATCAATCTCAGCAAAACTCCT
CAAGCATATATGTGCCTACCTCGTTTGCCTGTTGGGAGCCTTGTCTAATTTCAGATGATG
GTTAGCATTAGGATGCTTCCTATAACAAAACAATTCTTATTGTTCTCTTCAAAAAGAAAA
CTCAGCATGATACTTTCAAAATGTGTTCTGAAAGATGATATAATTACATAAAATACAGCT
AAAAGTTTTAACAGAATACCAGTTTAGTATCATTAAAAAAACACCCAATAAATCAAGAAT
AAACTAAAAGATATACAGAAGAGCAAAACTAAAAGACAGAAAATATTTCACAGATATTTC
TTATAAATCACATGTAATATGCAAGTTTTAGAGATTCACAGCTTATATAATATTAAATTA
ATCATATAATAAAAATTAAAAATTAACACCTTTAGGTATATTGCCAAGATTTAGTTGTTT
TAAATAAACTTTTCAATTCTTTTCTTTTCACTAAAGCATGTTTCTGTTTTTAAATTCCTT
AAGGAAAATGAAGAAATGAATAAAAATACTTGAAAATTAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               116-762, gnl|bosTau2|chr5 (13809994-13809355)
               

               
               116-762, gnl|Hg17|chr12 (89860573-89859924)
               

               
               116-762, gnl|Mm7|chr10 (97243585-97244201)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               116-762, gnl|bosTau2|chr5 (13809994-13809355)
               

               
               116-762, gnl|Hg17|chr12 (89860573-89859924)
               

               
               116-762, gnl|Mm7|chr10 (97243585-97244201)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nca (0.410621)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.410621)

	116-762, gnl\|bosTau2\|chr5 (13809994-13809355)
	116-762, gnl\|Hg17\|chr12 (89860573-89859924)
	116-762, gnl\|Mm7\|chr10 (97243585-97244201)