Non-Coding RNA Search

Ss1.1-Pig4-TMW8021H12.3

Sequence:


               
               AGGTTTCCCAAATGGGAGCAATATTATAGCCTGTTGCGATAAAGTAAAACATAAAACATT
TTAGACACTTCAGCAAAGTACATCTGGAAAATATATTTTTCTGTGTGCCTGTGTTTACAA
AAATGCACTTTTTGTTACTTTTTAAATTACAAATATGATAAGCACTGTTCAGATTAATTG
ATATATCTATATAACCTTTTAAAAAGATTGCTTAATATTTCATTGTATGAATGTACCTTG
ACTAATTTAGCCAATTCTCTATTAACAGGTATTTAAGTTTGTTTTCAGTTTTTGCTATAA
TAAAAAATTGCTACAATGAAGATCTTCAGTGAATTTGCTTAATTACTTTCATAAGATAAA
TTCCTGGAAATAAGATTGATTAATCAGGGTCAGAGGCTTTTTAAAAATATATATATAAGA
TTTTGATACCTCTGCTACCATGTCAGCCCTTAGGAGAAGTTGTATATCAATGAACACACT
CAACAGTAATGCCTCCTGCTGATCTTTTTCATCTTTGCCAGTTCGGGCAGGAAAAATGTA
TCTTATTGTCACTGTAATTTGTAGTTACTCCTTAGTTTTGCCTATATGTGTTGGTCACTC
ATTTTTTAAAATCTATGTATATATCTTTCTTATTTTTCTATCATAGAGCTTCTGTTTTCC
TTAATTTGTAAGAGCTGTTTATATACTAAAGGTAGCACTATCCTGTTATTTGACCATATG
CTGATTTCTCCATTTTTGTTTTTGTTGATCTTGTTTTGTTATTGTGATACCAATATTAAA
ATTTTTTGTGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGTTTCCCAAATGGGAGCAATATTATAGCCTGTTGCGATAAAGTAAAACATAAAACATT
TTAGACACTTCAGCAAAGTACATCTGGAAAATATATTTTTCTGTGTGCCTGTGTTTACAA
AAATGCACTTTTTGTTACTTTTTAAATTACAAATATGATAAGCACTGTTCAGATTAATTG
ATATATCTATATAACCTTTTAAAAAGATTGCTTAATATTTCATTGTATGAATGTACCTTG
ACTAATTTAGCCAATTCTCTATTAACAGGTATTTAAGTTTGTTTTCAGTTTTTGCTATAA
TAAAAAATTGCTACAATGAAGATCTTCAGTGAATTTGCTTAATTACTTTCATAAGATAAA
TTCCTGGAAATAAGATTGATTAATCAGGGTCAGAGGCTTTTTAAAAATATATATATAAGA
TTTTGATACCTCTGCTACCATGTCAGCCCTTAGGAGAAGTTGTATATCAATGAACACACT
CAACAGTAATGCCTCCTGCTGATCTTTTTCATCTTTGCCAGTTCGGGCAGGAAAAATGTA
TCTTATTGTCACTGTAATTTGTAGTTACTCCTTAGTTTTGCCTATATGTGTTGGTCACTC
ATTTTTTAAAATCTATGTATATATCTTTCTTATTTTTCTATCATAGAGCTTCTGTTTTCC
TTAATTTGTAAGAGCTGTTTATATACTAAAGGTAGCACTATCCTGTTATTTGACCATATG
CTGATTTCTCCATTTTTGTTTTTGTTGATCTTGTTTTGTTATTGTGATACCAATATTAAA
ATTTTTTGTGTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               52-792, gnl|bosTau2|chr3 (65943849-65944551)
               

               
               52-792, gnl|Hg17|chr1 (50606457-50607181)
               

               
               52-792, gnl|Mm7|chr4 (109349746-109349080)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               52-792, gnl|bosTau2|chr3 (65943849-65944551)
               

               
               52-792, gnl|Hg17|chr1 (50606457-50607181)
               

               
               52-792, gnl|Mm7|chr4 (109349746-109349080)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	52-792, gnl\|bosTau2\|chr3 (65943849-65944551)
	52-792, gnl\|Hg17\|chr1 (50606457-50607181)
	52-792, gnl\|Mm7\|chr4 (109349746-109349080)