Non-Coding RNA Search

Ss1.1-Pig4-TMW8021L22.3

Sequence:


               
               CTGGCCCCCATCTTGTTTTTAGTGAGCTTAACTTAAACATGTAGTTTGTCCTCCACTCCC
TTAAAAGCCTCGTCTTCCCAGTTTTGTTTTTTTAATCCATAAGTTTTCAGCAATTTGTAT
TATGGCTCAGAGGAAGGAAAAAAGGTTGGACTTCTCAGTTTTTGTTGTTGTTGTTTGTTG
TTTTTTTTTTGTTTGGTTTTTTTTTGTTGTTGTTGTTTTTAAATACAAAGCCTGCAATTT
ATCAGCCAAACAAATTTTTTTTTCTTCTGAGGATGGGATCAGAAACGACTTGGCGGGAAG
GCGGCTTAAGTTCCCAGCATCAAGTTCTCAGCCGTTCTCGCTGCCAGCTCGCAAGAAGGC
GCCGGGCTGCCCAGAACAATCTTTTCAAGGTTGGTGGGTTTGGCCCCCAGAAGTGAAATT
TTGTGGCGCCTGACGGTGGTCCTGGGTGTGGTGCAGCCCCATGTCACCGCCAGGAAACTG
TGCAAAGGAAAATCGGAACTGTCCAGTGGGGTCCAGGTTAAACCCTGGCCTCCAAGCCAC
CCCCGACCGGTCCCCTGCACACAGAGGTCCCCGGCCGCCGGAGCAGAGAGTTGGGCCACA
CCGAAGCTACCTCTGCCAGACTCTCCCCTCTGCGGGAGCCAAGTCCGGCCAAGTGCTGAC
CCACCTGGACGCCATGGAAGCCAATGCCCGGGGCCACGTTCAAGTGCCTTTGGTTCCTCC
TCCCTTTTTCAGCGTGGGGCCCTTCCTTAGCACTGAATCGTTGACACTGCCAACCAGATT
CTTTAAAACCATGGTCCGCCAGCGCTTCCCTGGGAACCCTGGATGAGTGAGTGGGGACAA
TTTTTATCTGACCTTGAAATTGAATTTTCAACTCGCCAATTGAGAACGACAAGAGGGAAA
CTTTTTTTTTTTTTAATAAACATTTTTTTTTCAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGCCCCCATCTTGTTTTTAGTGAGCTTAACTTAAACATGTAGTTTGTCCTCCACTCCC
TTAAAAGCCTCGTCTTCCCAGTTTTGTTTTTTTAATCCATAAGTTTTCAGCAATTTGTAT
TATGGCTCAGAGGAAGGAAAAAAGGTTGGACTTCTCAGTTTTTGTTGTTGTTGTTTGTTG
TTTTTTTTTTGTTTGGTTTTTTTTTGTTGTTGTTGTTTTTAAATACAAAGCCTGCAATTT
ATCAGCCAAACAAATTTTTTTTTCTTCTGAGGATGGGATCAGAAACGACTTGGCGGGAAG
GCGGCTTAAGTTCCCAGCATCAAGTTCTCAGCCGTTCTCGCTGCCAGCTCGCAAGAAGGC
GCCGGGCTGCCCAGAACAATCTTTTCAAGGTTGGTGGGTTTGGCCCCCAGAAGTGAAATT
TTGTGGCGCCTGACGGTGGTCCTGGGTGTGGTGCAGCCCCATGTCACCGCCAGGAAACTG
TGCAAAGGAAAATCGGAACTGTCCAGTGGGGTCCAGGTTAAACCCTGGCCTCCAAGCCAC
CCCCGACCGGTCCCCTGCACACAGAGGTCCCCGGCCGCCGGAGCAGAGAGTTGGGCCACA
CCGAAGCTACCTCTGCCAGACTCTCCCCTCTGCGGGAGCCAAGTCCGGCCAAGTGCTGAC
CCACCTGGACGCCATGGAAGCCAATGCCCGGGGCCACGTTCAAGTGCCTTTGGTTCCTCC
TCCCTTTTTCAGCGTGGGGCCCTTCCTTAGCACTGAATCGTTGACACTGCCAACCAGATT
CTTTAAAACCATGGTCCGCCAGCGCTTCCCTGGGAACCCTGGATGAGTGAGTGGGGACAA
TTTTTATCTGACCTTGAAATTGAATTTTCAACTCGCCAATTGAGAACGACAAGAGGGAAA
CTTTTTTTTTTTTTAATAAACATTTTTTTTTCAATG

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               2-176, gnl|bosTau2|chr7 (14718604-14718421)
               

               
               2-176, gnl|Hg17|chr19 (4911871-4912042)
               


               
               252-928, gnl|bosTau2|chr7 (14718344-14717634)
               

               
               252-928, gnl|Hg17|chr19 (4912097-4912821)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-176, gnl|bosTau2|chr7 (14718604-14718421)
               

               
               2-176, gnl|Hg17|chr19 (4911871-4912042)
               


               
               252-928, gnl|bosTau2|chr7 (14718344-14717634)
               

               
               252-928, gnl|Hg17|chr19 (4912097-4912821)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cly (0.120642)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)

	2-176, gnl\|bosTau2\|chr7 (14718604-14718421)
	2-176, gnl\|Hg17\|chr19 (4911871-4912042)

	252-928, gnl\|bosTau2\|chr7 (14718344-14717634)
	252-928, gnl\|Hg17\|chr19 (4912097-4912821)