Non-Coding RNA Search

Ss1.1-Pig4-TMW8022B03.5

Sequence:


               
               CTAGTTCTAGATCGCGACTGGAGTTTTTTTTTTTTTTTTTTTCCAAGTAAGGAAGTCAAT
TTTATTTTAAAAGATTATTTTATTACATATATAGTTGACTCCAGCTTCCAGAAATATAAT
TTAGCCCTTTTAAGAGCACTACGTCCTGAAATTTGAAAATAAACAATTTTAAATGACTAC
TACATTAGTAAATAAACATGAGAAAATACTACGTATATAGGTAGTGAAAAAAATTTTTAA
ATATTTAAAACACGTAAGGAACATAACTACTTTGTGGAAATGGCTCTACTTCATAACCCA
CCCAGTTAAAACTAGATGCTACCTCACAAGGAAAATAAATGTCTCACTGAAATGTTATTC
AATGTATCCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAGTTCTAGATCGCGACTGGAGTTTTTTTTTTTTTTTTTTTCCAAGTAAGGAAGTCAAT
TTTATTTTAAAAGATTATTTTATTACATATATAGTTGACTCCAGCTTCCAGAAATATAAT
TTAGCCCTTTTAAGAGCACTACGTCCTGAAATTTGAAAATAAACAATTTTAAATGACTAC
TACATTAGTAAATAAACATGAGAAAATACTACGTATATAGGTAGTGAAAAAAATTTTTAA
ATATTTAAAACACGTAAGGAACATAACTACTTTGTGGAAATGGCTCTACTTCATAACCCA
CCCAGTTAAAACTAGATGCTACCTCACAAGGAAAATAAATGTCTCACTGAAATGTTATTC
AATGTATCCCTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               45-372, gnl|bosTau2|chr20 (8287955-8288282)
               

               
               45-372, gnl|Hg17|chr5 (65514073-65513740)
               

               
               45-372, gnl|Mm7|chr13 (100878147-100878429)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               45-372, gnl|bosTau2|chr20 (8287955-8288282)
               

               
               45-372, gnl|Hg17|chr5 (65514073-65513740)
               

               
               45-372, gnl|Mm7|chr13 (100878147-100878429)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               csk (0.140746)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csk (0.140746)

	45-372, gnl\|bosTau2\|chr20 (8287955-8288282)
	45-372, gnl\|Hg17\|chr5 (65514073-65513740)
	45-372, gnl\|Mm7\|chr13 (100878147-100878429)