Ss1.1-Pig4-TMW8022E10.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGGGGACCCAAGCTGTGGGCCCGGCGCCTGGGCAAGTGCAAAGTCTACTGGGAGGTGGG AGGGCCCCTGGGCTCTGGCAGCCCCTCCACCCCCGCCTGCCTGCTGCCCCGAGACTGCGA CACCCCCATCTTCGACTTCGGCACCTTCTTCCAAGAGTTGATGGAGTTCCGGGCCCGCCG GCGCCAGGGCTCCCCACACTACACCATCTACCTGGGCTTCGGGCAGGACCTCTCCGTGGG GAGGCCCAAGGAGAAGAGCCTCGTCCTGGTGAAGTTGGAGCCATGGCTGTGTCGGACACA GCTGGAGAGCGTGCAGCGTGAAGGCGTGTCCTCCCTGGACAGCGGCAGCCTCAGCCTCTG CCTGTCCCCCTCCAACAGCCTCTATGACGAGCTGGAGCGCTTCCTGATGGAGGTGGAGCA GCCGGCCTAGGGTGGACCCTGGACCCCTCCCAATCCAATAAAAAAATTCCAAGACCCAAA AAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGGGGACCCAAGCTGTGGGCCCGGCGCCTGGGCAAGTGCAAAGTCTACTGGGAGGTGGG AGGGCCCCTGGGCTCTGGCAGCCCCTCCACCCCCGCCTGCCTGCTGCCCCGAGACTGCGA CACCCCCATCTTCGACTTCGGCACCTTCTTCCAAGAGTTGATGGAGTTCCGGGCCCGCCG GCGCCAGGGCTCCCCACACTACACCATCTACCTGGGCTTCGGGCAGGACCTCTCCGTGGG GAGGCCCAAGGAGAAGAGCCTCGTCCTGGTGAAGTTGGAGCCATGGCTGTGTCGGACACA GCTGGAGAGCGTGCAGCGTGAAGGCGTGTCCTCCCTGGACAGCGGCAGCCTCAGCCTCTG CCTGTCCCCCTCCAACAGCCTCTATGACGAGCTGGAGCGCTTCCTGATGGAGGTGGAGCA GCCGGCCTAGGGTGGACCCTGGACCCCTCCCAATCCAATAAAAAAATTCCAAGACCCAAA AAAAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 1-155, gnl|bosTau2|chr29 (45789464-45789310) | |
| 1-155, gnl|canFam2|chr18 (28698870-28699114) | |
| 1-155, gnl|dasNov1|scaffold_96189 (1948-1705) | |
| 1-155, gnl|echTel1|scaffold_296311 (30887-30643) | |
| 1-155, gnl|fr1|chrUn (46009969-46009734) | |
| 1-155, gnl|galGal2|chrUn (16547730-16547498) | |
| 1-155, gnl|hg17|chr11 (603199-603443) | |
| 1-155, gnl|Hg17|chr11 (603360-603206) | |
| 1-155, gnl|loxAfr1|scaffold_38162 (4117-3875) | |
| 1-155, gnl|mm7|chr7 (137680915-137681159) | |
| 1-155, gnl|Mm7|chr7 (137681076-137680922) | |
| 1-155, gnl|monDom2|scaffold_105 (4067965-4067727) | |
| 1-155, gnl|oryCun1|scaffold_167586 (5740-5984) | |
| 1-155, gnl|panTro1|chr9 (669860-670104) | |
| 1-155, gnl|rheMac2|chr14 (421327-421571) | |
| 1-155, gnl|rn3|chr1 (201608310-201608554) | |
| 1-155, gnl|tetNig1|chrUn_random (19117901-19118133) | |
| 273-467, gnl|bosTau2|chr29 (45789009-45788803) | |
| 273-467, gnl|Hg17|chr11 (602802-602627) | |
| 273-467, gnl|Mm7|chr7 (137680645-137680459) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-155, gnl|bosTau2|chr29 (45789464-45789310) | |
| 1-155, gnl|canFam2|chr18 (28698870-28699114) | |
| 1-155, gnl|dasNov1|scaffold_96189 (1948-1705) | |
| 1-155, gnl|echTel1|scaffold_296311 (30887-30643) | |
| 1-155, gnl|fr1|chrUn (46009969-46009734) | |
| 1-155, gnl|galGal2|chrUn (16547730-16547498) | |
| 1-155, gnl|hg17|chr11 (603199-603443) | |
| 1-155, gnl|Hg17|chr11 (603360-603206) | |
| 1-155, gnl|loxAfr1|scaffold_38162 (4117-3875) | |
| 1-155, gnl|mm7|chr7 (137680915-137681159) | |
| 1-155, gnl|Mm7|chr7 (137681076-137680922) | |
| 1-155, gnl|monDom2|scaffold_105 (4067965-4067727) | |
| 1-155, gnl|oryCun1|scaffold_167586 (5740-5984) | |
| 1-155, gnl|panTro1|chr9 (669860-670104) | |
| 1-155, gnl|rheMac2|chr14 (421327-421571) | |
| 1-155, gnl|rn3|chr1 (201608310-201608554) | |
| 1-155, gnl|tetNig1|chrUn_random (19117901-19118133) | |
| 273-467, gnl|bosTau2|chr29 (45789009-45788803) | |
| 273-467, gnl|Hg17|chr11 (602802-602627) | |
| 273-467, gnl|Mm7|chr7 (137680645-137680459) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| cga (0.558191) | |
| col (0.195008) | |
| nje (0.16592) | |
| cag (0.151194) | |
| jej (0.0989218) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cga (0.558191) | |
| col (0.195008) | |
| nje (0.16592) | |
| cag (0.151194) | |
| jej (0.0989218) |