Non-Coding RNA Search

Ss1.1-Pig4-TMW8022G17.3

Sequence:


               
               TAAATTGCTGTTTGCAGTAAGAGTAAGTGCAAAGCAAGATATGTAAGTTATGACTGTATG
ATCAGATGAAGTATGCGTTCTTTTGGTTTACATCCTTAAATAGCTACAGATCCATGATAA
AAACTTTGGACTCTTTATAAAACAATGTTGCCAAAGTGTGATCATGTCAGTGCCAACGAA
AGACAAGTACTTCACTCTTTTTCATACTATTATAAGTTATTCTAGTATTAAATATTTTAA
TAAAACTGTCTTTGTTTTGACATATTTCAGTTAGATGAATGGATGCTGATTGGTTTTCAT
TTGAATTAGTCATAATTCATTTTTGCCATCTTTTCAGAAAGAATCAGCAAATTTTTTCTA
TGTTAGAAACCGTGGATGGCAAGCCAATATAGGACAGCCTGTCACATGATTTTTTTCTTT
CTTTTTTTTTTTTTTTTAAATACCAAAGCTTGGAGTCTGGCCTGTGAACACATGGAGAAG
ATTTTATAATTAGCACATCCTTGGCGATATCTCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAATTGCTGTTTGCAGTAAGAGTAAGTGCAAAGCAAGATATGTAAGTTATGACTGTATG
ATCAGATGAAGTATGCGTTCTTTTGGTTTACATCCTTAAATAGCTACAGATCCATGATAA
AAACTTTGGACTCTTTATAAAACAATGTTGCCAAAGTGTGATCATGTCAGTGCCAACGAA
AGACAAGTACTTCACTCTTTTTCATACTATTATAAGTTATTCTAGTATTAAATATTTTAA
TAAAACTGTCTTTGTTTTGACATATTTCAGTTAGATGAATGGATGCTGATTGGTTTTCAT
TTGAATTAGTCATAATTCATTTTTGCCATCTTTTCAGAAAGAATCAGCAAATTTTTTCTA
TGTTAGAAACCGTGGATGGCAAGCCAATATAGGACAGCCTGTCACATGATTTTTTTCTTT
CTTTTTTTTTTTTTTTTAAATACCAAAGCTTGGAGTCTGGCCTGTGAACACATGGAGAAG
ATTTTATAATTAGCACATCCTTGGCGATATCTCCAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-515, gnl|bosTau2|chr13 (21581641-21582142)
               

               
               1-515, gnl|Hg17|chr10 (28002560-28002062)
               

               
               1-515, gnl|Mm7|chr18 (7139103-7138641)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-515, gnl|bosTau2|chr13 (21581641-21582142)
               

               
               1-515, gnl|Hg17|chr10 (28002560-28002062)
               

               
               1-515, gnl|Mm7|chr18 (7139103-7138641)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ova (0.258264)
               

               
               mgm (0.180343)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.258264)
               

               
               mgm (0.180343)

	1-515, gnl\|bosTau2\|chr13 (21581641-21582142)
	1-515, gnl\|Hg17\|chr10 (28002560-28002062)
	1-515, gnl\|Mm7\|chr18 (7139103-7138641)