Ss1.1-Pig4-TMW8022J14.3
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GGAACTTCCACATCCAAAGTCCATGCTTCAGGCAACAGCTGAAGCTAATAATCTTGCTGC
AGTAGCAGGAGCAAGAGAGATTTACTGCAAAAGCATGGAGCAGGTATGTGGTGGGGACAA
GCCTTACATTGCACCTTCGGATCTGGAGCGAAAACATCTGGATCTCAAGGAAGTGGCGAT
TAAACAGTTTCGTTCAGTAAAAAAAATGGGTGGAGATGAATTCTGCCGTCGTTATCAGGA
CCAGCTTGAGGCTGAAATTGAAGAAACCTATGCAAATTTTATTAAGCACAATGATGGCAA
AAATATCTTCTATGCTGCTCGTACCCCTGCCACACTGTTTGCGGTCATGTTTGCTATGTA
CATAATCTCAGGACTGACTGGCTTCGTTGGCCTAAACTCTATAGCTGTCTTGTGTAACCT
TGTCATGGGGTTAGCACTGACATCTCTTTGTACTTGGGCATATGTTAAATACTCTGGGGA
GTTCAGAGAAATTGGAACAATGATTGATCAGATTGCTGAAACACTATGGGAACAGGTATT
GAAGCCCCTGGGTGATAATTTGATGGAGGAAAACATAAGGCAGTCTGTAACAAACTCTAT
CAAAGCAGGCCTGACTGACCAGGTGTCTCATCATGCCAGATTAAAGACAGACTGACAGTT
CATCTCCTCATGGACTCCACTCTCCCTTTTTTTCATGCTTGCTGTACAATGAGAACTCAA
TAAAAATAAACCAAAGTTTACAATCAACTGTAGAAGTAGTTTAGTATAACTGGCTTCACA
GATGGCTGCCAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GGAACTTCCACATCCAAAGTCCATGCTTCAGGCAACAGCTGAAGCTAATAATCTTGCTGC
AGTAGCAGGAGCAAGAGAGATTTACTGCAAAAGCATGGAGCAGGTATGTGGTGGGGACAA
GCCTTACATTGCACCTTCGGATCTGGAGCGAAAACATCTGGATCTCAAGGAAGTGGCGAT
TAAACAGTTTCGTTCAGTAAAAAAAATGGGTGGAGATGAATTCTGCCGTCGTTATCAGGA
CCAGCTTGAGGCTGAAATTGAAGAAACCTATGCAAATTTTATTAAGCACAATGATGGCAA
AAATATCTTCTATGCTGCTCGTACCCCTGCCACACTGTTTGCGGTCATGTTTGCTATGTA
CATAATCTCAGGACTGACTGGCTTCGTTGGCCTAAACTCTATAGCTGTCTTGTGTAACCT
TGTCATGGGGTTAGCACTGACATCTCTTTGTACTTGGGCATATGTTAAATACTCTGGGGA
GTTCAGAGAAATTGGAACAATGATTGATCAGATTGCTGAAACACTATGGGAACAGGTATT
GAAGCCCCTGGGTGATAATTTGATGGAGGAAAACATAAGGCAGTCTGTAACAAACTCTAT
CAAAGCAGGCCTGACTGACCAGGTGTCTCATCATGCCAGATTAAAGACAGACTGACAGTT
CATCTCCTCATGGACTCCACTCTCCCTTTTTTTCATGCTTGCTGTACAATGAGAACTCAA
TAAAAATAAACCAAAGTTTACAATCAACTGTAGAAGTAGTTTAGTATAACTGGCTTCACA
GATGGCTGCCAC
|
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gi|13905270|gb|AAH06934.1| |
Protein identifier
|
gi|13905270|gb|AAH06934.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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101-539, gnl|bosTau2|chr10 (29042469-29042907) |
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101-539, gnl|canFam2|chr8 (30035696-30035987) |
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101-539, gnl|danRer3|chr13 (39470920-39471196) |
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101-539, gnl|dasNov1|scaffold_2146 (82908-82634) |
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101-539, gnl|echTel1|scaffold_184074 (2473-2175) |
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101-539, gnl|fr1|chrUn (2717088-2716800) |
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101-539, gnl|galGal2|chr5 (54573195-54573461) |
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101-539, gnl|hg17|chr14 (50164469-50164761) |
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101-539, gnl|Hg17|chr14 (50164496-50164934) |
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101-539, gnl|loxAfr1|scaffold_3115 (61367-61069) |
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101-539, gnl|mm7|chr12 (67900005-67900295) |
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101-539, gnl|Mm7|chr12 (67900030-67900468) |
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101-539, gnl|monDom2|scaffold_73 (6706208-6706505) |
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101-539, gnl|oryCun1|scaffold_198782 (12255-12547) |
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101-539, gnl|panTro1|chr15 (49579392-49579684) |
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101-539, gnl|rheMac2|chr7 (113687386-113687678) |
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101-539, gnl|rn3|chr6 (92075909-92076201) |
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101-539, gnl|tetNig1|chr10 (11282561-11282264) |
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101-539, gnl|xenTro1|scaffold_666 (538150-537858) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
101-539, gnl|bosTau2|chr10 (29042469-29042907) |
|
101-539, gnl|canFam2|chr8 (30035696-30035987) |
|
101-539, gnl|danRer3|chr13 (39470920-39471196) |
|
101-539, gnl|dasNov1|scaffold_2146 (82908-82634) |
|
101-539, gnl|echTel1|scaffold_184074 (2473-2175) |
|
101-539, gnl|fr1|chrUn (2717088-2716800) |
|
101-539, gnl|galGal2|chr5 (54573195-54573461) |
|
101-539, gnl|hg17|chr14 (50164469-50164761) |
|
101-539, gnl|Hg17|chr14 (50164496-50164934) |
|
101-539, gnl|loxAfr1|scaffold_3115 (61367-61069) |
|
101-539, gnl|mm7|chr12 (67900005-67900295) |
|
101-539, gnl|Mm7|chr12 (67900030-67900468) |
|
101-539, gnl|monDom2|scaffold_73 (6706208-6706505) |
|
101-539, gnl|oryCun1|scaffold_198782 (12255-12547) |
|
101-539, gnl|panTro1|chr15 (49579392-49579684) |
|
101-539, gnl|rheMac2|chr7 (113687386-113687678) |
|
101-539, gnl|rn3|chr6 (92075909-92076201) |
|
101-539, gnl|tetNig1|chr10 (11282561-11282264) |
|
101-539, gnl|xenTro1|scaffold_666 (538150-537858) |
|
tes (0.207814) |
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mgm (0.180343) |
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tbr (0.154178) |
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ski (0.146735) |
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lnt (0.142308) |
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ssp (0.13552) |
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cty (0.10408) |
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ldo (0.0970026) |
|
tes (0.207814) |
|
mgm (0.180343) |
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tbr (0.154178) |
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ski (0.146735) |
|
lnt (0.142308) |
|
ssp (0.13552) |
|
cty (0.10408) |
|
ldo (0.0970026) |
