Non-Coding RNA Search

Ss1.1-Pig4-TMW8022K16.3

Sequence:


               
               CTCTTTCTCCTGAAGTTGTCTAACGTCGAGCCTTTTATCCCCGTTCTCTCGTAGGCTTCT
GAATTCCCTTCTGAGTTAATGTCAAGTGACAGCAAAGCGCTCTGTGGCTGAATAAATGGT
GAGTGTTTGCTTGTGCCACCGGTCGGTGAACCGGCACTCGGGGTGTGTGCGCGCGCGCGC
GCGTGTACTTGCGAATCTGTAAAATGTTGGGTTTGGTAGATGAACGTGTACTTGGTTGTA
TAACACGTAGTACATTGTTTACGTGTACTAGATGTGAAGAGGCATCTGGCTCCTGTTACT
CAAATTCACGGAAGATTTTCCTTAAAAAAAAAAAAAAAAATGCCAGTAACTATGGAAGGT
GGCAGAGGAAACTGTGTAACTGTGTCCCGGTTTTATGTGCCAGTATCATGCCTGGGCTGT
TTTCTGCTCATGCTCTGGTACTACGAGGTACTAACCCCCGTGTAATTAATCTTATCACCG
CAAATTCCATCGGGATCCTCCCTCCCTAAAACTCCAGCCCTCTGGGACCAGGCTAGCCAA
GCATTGCTGCCCTGTGCCTCAGCCCCTGTGATGTGGGATTCCGACTTCCCAATCTGTTAA
CTAAAGGGCTGTTTTCAATCAAATAATTGTTACAAGAAGCAGACTGGCGCCTATGAGCCC
TGCCGCTGGAGATCCAAATAGGAGATTGCATTGGGAAGTTTTTCGCCTGAGTCTCTGCTA
TTTTAATGTTTAATTTGCGCTGTCGAGGCCGAGTGTGTGTCTTGCATCTGTGGACGCCAG
GGTTTGCCCAATGTTTGAGTGTTTGGTTAAATGTTCAAACTGCGGCTTCCTCCTGGCGCC
AGTCTGCCCGCCTCTGCCCTTAGGTTAAAATCTCCTAAACAATCCTTTCTCTCTCGATCT
TTTGCAGGTGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTTTCTCCTGAAGTTGTCTAACGTCGAGCCTTTTATCCCCGTTCTCTCGTAGGCTTCT
GAATTCCCTTCTGAGTTAATGTCAAGTGACAGCAAAGCGCTCTGTGGCTGAATAAATGGT
GAGTGTTTGCTTGTGCCACCGGTCGGTGAACCGGCACTCGGGGTGTGTGCGCGCGCGCGC
GCGTGTACTTGCGAATCTGTAAAATGTTGGGTTTGGTAGATGAACGTGTACTTGGTTGTA
TAACACGTAGTACATTGTTTACGTGTACTAGATGTGAAGAGGCATCTGGCTCCTGTTACT
CAAATTCACGGAAGATTTTCCTTAAAAAAAAAAAAAAAAATGCCAGTAACTATGGAAGGT
GGCAGAGGAAACTGTGTAACTGTGTCCCGGTTTTATGTGCCAGTATCATGCCTGGGCTGT
TTTCTGCTCATGCTCTGGTACTACGAGGTACTAACCCCCGTGTAATTAATCTTATCACCG
CAAATTCCATCGGGATCCTCCCTCCCTAAAACTCCAGCCCTCTGGGACCAGGCTAGCCAA
GCATTGCTGCCCTGTGCCTCAGCCCCTGTGATGTGGGATTCCGACTTCCCAATCTGTTAA
CTAAAGGGCTGTTTTCAATCAAATAATTGTTACAAGAAGCAGACTGGCGCCTATGAGCCC
TGCCGCTGGAGATCCAAATAGGAGATTGCATTGGGAAGTTTTTCGCCTGAGTCTCTGCTA
TTTTAATGTTTAATTTGCGCTGTCGAGGCCGAGTGTGTGTCTTGCATCTGTGGACGCCAG
GGTTTGCCCAATGTTTGAGTGTTTGGTTAAATGTTCAAACTGCGGCTTCCTCCTGGCGCC
AGTCTGCCCGCCTCTGCCCTTAGGTTAAAATCTCCTAAACAATCCTTTCTCTCTCGATCT
TTTGCAGGTGTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-340, gnl|bosTau2|chr11 (69161521-69161862)
               

               
               2-340, gnl|Hg17|chr2 (8773517-8773848)
               

               
               2-340, gnl|Mm7|chr12 (22931929-22931618)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-340, gnl|bosTau2|chr11 (69161521-69161862)
               

               
               2-340, gnl|Hg17|chr2 (8773517-8773848)
               

               
               2-340, gnl|Mm7|chr12 (22931929-22931618)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               fty (0.17584)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               eru (0.120048)

	2-340, gnl\|bosTau2\|chr11 (69161521-69161862)
	2-340, gnl\|Hg17\|chr2 (8773517-8773848)
	2-340, gnl\|Mm7\|chr12 (22931929-22931618)