Ss1.1-Pig4-TMW8022K22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGACCGGGGGGCGCCTTGTCTGGTTCTGGTCCTGGCGTAGAAATTCCACATTCAACGAG GCCGGATCCTGGAGAACATCTCGCTGTCGGTGAAGAAGTTGCAGAGCTACTTTGCTGCAT GTGAAGATGAGACCCCTGCCATCCGGAACCACGACAAGGTCCTGCAGCGGCTATGTGAGC ACCTGGACCACGCCCTGCTCTACGGACTGCAAGACCTCTCATCTGGCTACTGGGTGCTCG TGGTGCATTTCACCCGGAGAGAGGCCGTCAAGCAGATCGAGGTGCTGCAGCACGTGGCCA CCAACCTGGGGCGCAGCCGGGCCTGGCTGTACCTGAGCTCACCTCATCTCAGCTGCTGGG CATGGAGGAGAGGAAAGCAGAGACCAGGAAAGGAGGTTACATGCAGGGGAGCCTTGTTCT TCTGGGGCTGGAACGGGTTGCCCCCCAGGCCTCTAGCTGGTCAGGGGCTACTGGGCCAGT GCCAAGCTGAGAAGCAGCTGGGGTCCAAGAAGTTCCCCTGAGGTTCTCAGATAAAATGTG CAAAGCTTGGAGTTCCCTGGGGGGGTCTAGCAGTTAAGGATTCAGTGTCACTGCTGTAAC TCAGTCCCTGGCCTGGGAACTTCCACATGCCACAGGCACAGCCAAAAAAAATAAATAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGACCGGGGGGCGCCTTGTCTGGTTCTGGTCCTGGCGTAGAAATTCCACATTCAACGAG GCCGGATCCTGGAGAACATCTCGCTGTCGGTGAAGAAGTTGCAGAGCTACTTTGCTGCAT GTGAAGATGAGACCCCTGCCATCCGGAACCACGACAAGGTCCTGCAGCGGCTATGTGAGC ACCTGGACCACGCCCTGCTCTACGGACTGCAAGACCTCTCATCTGGCTACTGGGTGCTCG TGGTGCATTTCACCCGGAGAGAGGCCGTCAAGCAGATCGAGGTGCTGCAGCACGTGGCCA CCAACCTGGGGCGCAGCCGGGCCTGGCTGTACCTGAGCTCACCTCATCTCAGCTGCTGGG CATGGAGGAGAGGAAAGCAGAGACCAGGAAAGGAGGTTACATGCAGGGGAGCCTTGTTCT TCTGGGGCTGGAACGGGTTGCCCCCCAGGCCTCTAGCTGGTCAGGGGCTACTGGGCCAGT GCCAAGCTGAGAAGCAGCTGGGGTCCAAGAAGTTCCCCTGAGGTTCTCAGATAAAATGTG CAAAGCTTGGAGTTCCCTGGGGGGGTCTAGCAGTTAAGGATTCAGTGTCACTGCTGTAAC TCAGTCCCTGGCCTGGGAACTTCCACATGCCACAGGCACAGCCAAAAAAAATAAATAAAA |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 97-205, gnl|bosTau2|chr16 (38953131-38953239) | |
| 97-205, gnl|canFam2|chr2 (84778785-84778656) | |
| 97-205, gnl|danRer3|chr23 (33094796-33094935) | |
| 97-205, gnl|dasNov1|scaffold_40633 (9737-9588) | |
| 97-205, gnl|echTel1|scaffold_303601 (5795-5932) | |
| 97-205, gnl|fr1|chrUn (105040911-105041038) | |
| 97-205, gnl|galGal2|chr21 (4062001-4062190) | |
| 97-205, gnl|hg17|chr1 (15788021-15788168) | |
| 97-205, gnl|Hg17|chr1 (15788036-15788144) | |
| 97-205, gnl|loxAfr1|scaffold_113 (210440-210291) | |
| 97-205, gnl|mm7|chr4 (141021207-141021082) | |
| 97-205, gnl|Mm7|chr4 (141021199-141021091) | |
| 97-205, gnl|monDom2|scaffold_109 (3543427-3543271) | |
| 97-205, gnl|oryCun1|scaffold_198335 (41280-41414) | |
| 97-205, gnl|panTro1|chr1 (15954170-15954318) | |
| 97-205, gnl|rheMac2|chr1 (18500973-18501122) | |
| 97-205, gnl|rn3|chr5 (160553851-160553717) | |
| 97-205, gnl|tetNig1|chrUn_random (28360623-28360509) | |
| 97-205, gnl|xenTro1|scaffold_1872 (33413-33540) | |
| 207-316, gnl|bosTau2|chr16 (38953643-38953752) | |
| 207-316, gnl|Hg17|chr1 (15788509-15788618) | |
| 207-316, gnl|Mm7|chr4 (141020955-141020846) | |
| 328-554, gnl|bosTau2|chr16 (38957045-38957273) | |
| 328-554, gnl|Hg17|chr1 (15792733-15793017) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 97-205, gnl|bosTau2|chr16 (38953131-38953239) | |
| 97-205, gnl|canFam2|chr2 (84778785-84778656) | |
| 97-205, gnl|danRer3|chr23 (33094796-33094935) | |
| 97-205, gnl|dasNov1|scaffold_40633 (9737-9588) | |
| 97-205, gnl|echTel1|scaffold_303601 (5795-5932) | |
| 97-205, gnl|fr1|chrUn (105040911-105041038) | |
| 97-205, gnl|galGal2|chr21 (4062001-4062190) | |
| 97-205, gnl|hg17|chr1 (15788021-15788168) | |
| 97-205, gnl|Hg17|chr1 (15788036-15788144) | |
| 97-205, gnl|loxAfr1|scaffold_113 (210440-210291) | |
| 97-205, gnl|mm7|chr4 (141021207-141021082) | |
| 97-205, gnl|Mm7|chr4 (141021199-141021091) | |
| 97-205, gnl|monDom2|scaffold_109 (3543427-3543271) | |
| 97-205, gnl|oryCun1|scaffold_198335 (41280-41414) | |
| 97-205, gnl|panTro1|chr1 (15954170-15954318) | |
| 97-205, gnl|rheMac2|chr1 (18500973-18501122) | |
| 97-205, gnl|rn3|chr5 (160553851-160553717) | |
| 97-205, gnl|tetNig1|chrUn_random (28360623-28360509) | |
| 97-205, gnl|xenTro1|scaffold_1872 (33413-33540) | |
| 207-316, gnl|bosTau2|chr16 (38953643-38953752) | |
| 207-316, gnl|Hg17|chr1 (15788509-15788618) | |
| 207-316, gnl|Mm7|chr4 (141020955-141020846) | |
| 328-554, gnl|bosTau2|chr16 (38957045-38957273) | |
| 328-554, gnl|Hg17|chr1 (15792733-15793017) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hlv (0.139256) |