Ss1.1-Pig4-TMW8022P07.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCAGAAACAGTTTGTGCTCACACTGAGCGAACTCAAGCGCCTCTTCAACCTGCACTTGGC CAGCCTGCCCCCTGGCCACACGCTGTTCAGCGGCATCTCGGACCGCATGCTGCAGGACAC GGTGCTGGCCGCCGGCTGCAAGCAGATACTGGTGCCTTTTCCCCCACAGACTGCTGCTTC CCCGGATGAGCAGAAGGTGTTCGCCCTCTGGGAGTCTGGAGACATGAGTGACCAGCACCG ACAGGTTTTGCTTGAAATTTTTTCCAAAAATTACCGCGTACGCCGGAACATGATCCAGTC TCGGCTAACTCAAGAGTGTGGAGAAGATCTGAGTAAACAGGAGGTGGATAAAGTGCTCAA GGACTGCTGTGTAAGCTATGGTGGCATGTGGTACCTTAAAGGGACGGTACAGTCTTGACA ATGGTTGCAAACCATTACCCCAGTGAATCCAAGCCCAGGAAGGACGGCAGAGCCGGCAGA GGTGGAAGTAGAGTCTCGATTGCTTCAGAAGACACAGCGCAAGAGGGACTGAGCATCTCG TGGCCTGTGGCGTTGCACTGTGGACAGAGGGGATCGTGCTCAGCCAGTGGTAGGGTCAGC TTAAGTTAGATCACTCCCAGAGGAGACCAGCCGGGACCTCCTTTGCAGTACAGTTTGAAA TTCCTGATGTATTTTGCTTATTATTTGGTTTCATTCTCATAATAAAGAGAGTGTATACTG AAAAAAAAAAAAAAAAAAAAAAAAATGGTTCAACATCTTTCAACCTTAATGCCAACAAGG TCTAAGTTATGTTTACAAGATGAAGAAAACCTCAAGGTTTTTAATATTTAAAATGCCTAG AAGCCAATATTAAATCTTCAATTATCTATCTACAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCAGAAACAGTTTGTGCTCACACTGAGCGAACTCAAGCGCCTCTTCAACCTGCACTTGGC CAGCCTGCCCCCTGGCCACACGCTGTTCAGCGGCATCTCGGACCGCATGCTGCAGGACAC GGTGCTGGCCGCCGGCTGCAAGCAGATACTGGTGCCTTTTCCCCCACAGACTGCTGCTTC CCCGGATGAGCAGAAGGTGTTCGCCCTCTGGGAGTCTGGAGACATGAGTGACCAGCACCG ACAGGTTTTGCTTGAAATTTTTTCCAAAAATTACCGCGTACGCCGGAACATGATCCAGTC TCGGCTAACTCAAGAGTGTGGAGAAGATCTGAGTAAACAGGAGGTGGATAAAGTGCTCAA GGACTGCTGTGTAAGCTATGGTGGCATGTGGTACCTTAAAGGGACGGTACAGTCTTGACA ATGGTTGCAAACCATTACCCCAGTGAATCCAAGCCCAGGAAGGACGGCAGAGCCGGCAGA GGTGGAAGTAGAGTCTCGATTGCTTCAGAAGACACAGCGCAAGAGGGACTGAGCATCTCG TGGCCTGTGGCGTTGCACTGTGGACAGAGGGGATCGTGCTCAGCCAGTGGTAGGGTCAGC TTAAGTTAGATCACTCCCAGAGGAGACCAGCCGGGACCTCCTTTGCAGTACAGTTTGAAA TTCCTGATGTATTTTGCTTATTATTTGGTTTCATTCTCATAATAAAGAGAGTGTATACTG AAAAAAAAAAAAAAAAAAAAAAAAATGGTTCAACATCTTTCAACCTTAATGCCAACAAGG TCTAAGTTATGTTTACAAGATGAAGAAAACCTCAAGGTTTTTAATATTTAAAATGCCTAG AAGCCAATATTAAATCTTCAATTATCTATCTACAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-157, gnl|bosTau2|chr25 (18731483-18731327) | |
| 1-157, gnl|canFam2|chr6 (26363022-26362734) | |
| 1-157, gnl|danRer3|chrNA (90177347-90177105) | |
| 1-157, gnl|dasNov1|scaffold_14841 (44105-44384) | |
| 1-157, gnl|echTel1|scaffold_278787 (26606-26326) | |
| 1-157, gnl|fr1|chrUn (308056354-308056111) | |
| 1-157, gnl|galGal2|chr14 (10872051-10872324) | |
| 1-157, gnl|hg17|chr16 (22244846-22245124) | |
| 1-157, gnl|Hg17|chr16 (22244944-22245100) | |
| 1-157, gnl|loxAfr1|scaffold_18080 (67957-68243) | |
| 1-157, gnl|mm7|chr7 (116862854-116863132) | |
| 1-157, gnl|Mm7|chr7 (116862952-116863108) | |
| 1-157, gnl|monDom2|scaffold_19 (42767985-42768256) | |
| 1-157, gnl|panTro1|chr18_random (10407501-10407779) | |
| 1-157, gnl|rheMac2|chr20 (20743538-20743800) | |
| 1-157, gnl|rn3|chr1 (179929219-179929498) | |
| 1-157, gnl|tetNig1|chrUn_random (99921164-99921407) | |
| 1-157, gnl|xenTro1|scaffold_6 (2880261-2880005) | |
| 360-876, gnl|bosTau2|chr25 (18725507-18724982) | |
| 360-876, gnl|Hg17|chr16 (22252464-22252986) | |
| 360-876, gnl|Mm7|chr7 (116867757-116868264) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-157, gnl|bosTau2|chr25 (18731483-18731327) | |
| 1-157, gnl|canFam2|chr6 (26363022-26362734) | |
| 1-157, gnl|danRer3|chrNA (90177347-90177105) | |
| 1-157, gnl|dasNov1|scaffold_14841 (44105-44384) | |
| 1-157, gnl|echTel1|scaffold_278787 (26606-26326) | |
| 1-157, gnl|fr1|chrUn (308056354-308056111) | |
| 1-157, gnl|galGal2|chr14 (10872051-10872324) | |
| 1-157, gnl|hg17|chr16 (22244846-22245124) | |
| 1-157, gnl|Hg17|chr16 (22244944-22245100) | |
| 1-157, gnl|loxAfr1|scaffold_18080 (67957-68243) | |
| 1-157, gnl|mm7|chr7 (116862854-116863132) | |
| 1-157, gnl|Mm7|chr7 (116862952-116863108) | |
| 1-157, gnl|monDom2|scaffold_19 (42767985-42768256) | |
| 1-157, gnl|panTro1|chr18_random (10407501-10407779) | |
| 1-157, gnl|rheMac2|chr20 (20743538-20743800) | |
| 1-157, gnl|rn3|chr1 (179929219-179929498) | |
| 1-157, gnl|tetNig1|chrUn_random (99921164-99921407) | |
| 1-157, gnl|xenTro1|scaffold_6 (2880261-2880005) | |
| 360-876, gnl|bosTau2|chr25 (18725507-18724982) | |
| 360-876, gnl|Hg17|chr16 (22252464-22252986) | |
| 360-876, gnl|Mm7|chr7 (116867757-116868264) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| sme (0.305437) | |
| cte (0.29274) | |
| spl (0.143184) | |
| lnt (0.142308) | |
| ova (0.129132) | |
| eru (0.120048) | |
| nbm (0.0993246) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sme (0.305437) | |
| cte (0.29274) | |
| spl (0.143184) | |
| lnt (0.142308) | |
| ova (0.129132) | |
| eru (0.120048) | |
| nbm (0.0993246) |