Non-Coding RNA Search

Ss1.1-Pig4-TMW8023E21.5

Sequence:


               
               CCCGCACAGCCACACCAAGTGAGTATACCTAGTCCTGCCTCTCTCCTGGACCCCACGCTG
CAGCTCTAGGCTTTGCCATGCTTCCAGCTGCTTTTCCTCCCACTAGTCCAGCCTCAAGCC
GTTCTGGAGTCCCGGGCGGGATTTTACCCGCTTTTTCTTCAAGACTTGGCTTGAAGCTGT
AAACCTAGCCTGCTCCTGGGCTTTGAGCTCCCTCCGCAGGCAGCATCACAGATGCACAGG
TTCTTTTAGGTTCAGGTGGGGCCTGTGTTTTGTCCAGCTCTGGGGCACCCAGGTTGATGC
CTAGTGAGGGAGCTTCGGCAGCCCCTCCTGGCATCTTGGCTTTCGGCACTGCCGGTTGGT
CTTTCTTGGGTTGAATGGGGCCTCCTGGTGTCCCTGTGCTGCTCTGATAGAACAAGCATC
ACTGTTCTAAGCCACCAGCTCGCAGACCAGCCCCACCATCCCTGATGTGGGCCGGCTCTC
ACCCTACCTTCTCTCCCTGCAGACCCTATGTTCGCTCCAAGGGCCGGAAGTTCGAGCGCG
CCAGAGGCCGACGTGCCAGCCGCGGCTACAAAAACTAACCCCAGAGCCTGCCTTGTTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCGCACAGCCACACCAAGTGAGTATACCTAGTCCTGCCTCTCTCCTGGACCCCACGCTG
CAGCTCTAGGCTTTGCCATGCTTCCAGCTGCTTTTCCTCCCACTAGTCCAGCCTCAAGCC
GTTCTGGAGTCCCGGGCGGGATTTTACCCGCTTTTTCTTCAAGACTTGGCTTGAAGCTGT
AAACCTAGCCTGCTCCTGGGCTTTGAGCTCCCTCCGCAGGCAGCATCACAGATGCACAGG
TTCTTTTAGGTTCAGGTGGGGCCTGTGTTTTGTCCAGCTCTGGGGCACCCAGGTTGATGC
CTAGTGAGGGAGCTTCGGCAGCCCCTCCTGGCATCTTGGCTTTCGGCACTGCCGGTTGGT
CTTTCTTGGGTTGAATGGGGCCTCCTGGTGTCCCTGTGCTGCTCTGATAGAACAAGCATC
ACTGTTCTAAGCCACCAGCTCGCAGACCAGCCCCACCATCCCTGATGTGGGCCGGCTCTC
ACCCTACCTTCTCTCCCTGCAGACCCTATGTTCGCTCCAAGGGCCGGAAGTTCGAGCGCG
CCAGAGGCCGACGTGCCAGCCGCGGCTACAAAAACTAACCCCAGAGCCTGCCTTGTTATT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               148-600, gnl|bosTau2|chr18 (50560872-50561330)
               

               
               148-600, gnl|Hg17|chr19 (53810868-53810419)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               148-600, gnl|bosTau2|chr18 (50560872-50561330)
               

               
               148-600, gnl|Hg17|chr19 (53810868-53810419)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fty (0.17584)
               

               
               ese (0.126502)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               ese (0.126502)

	148-600, gnl\|bosTau2\|chr18 (50560872-50561330)
	148-600, gnl\|Hg17\|chr19 (53810868-53810419)