Non-Coding RNA Search

Ss1.1-Pig4-TMW8023G06.5

Sequence:


               
               GCTCAGCTGCCAAGTGGGAGTGAGAGCTGCGCTTCTGCACCCGCGTTGCTTCAGGGACGC
AGCGGTGGGAAAAGCACCAGCACCAGGGGTTCGCGCTTTAATCCATTGGAACTTCTTCCT
TGTGGACAGTGTGAGGAGCGATCCACCATGCCTGAAGTCAAAGACCTTTCGGAAGCCTTG
CCAGAGACGTCCATGGATCCCATCACGGGAGTGGGAGTGGTGGCTTCTCGGAACCGAGCC
CCAACAGGCTACGACGTAGTTGCGCAGACAGCAGATGGCGTGGATGCTGACCTCTGGAAA
GACGGCTTATTTAAATCCAAGGTTACCAGATACCTGTGTTTCACAAGATCATTTTCCAAA
GAAAATAGTCATTTAGGGAACGTGCTAGTGGATATGAAGCTCATTGACATCAAGGACACT
CTGCCTGTAGGCTTCATCCCGATTCAGGAGACCGTGGACACACAGGAAGTGGCTTTTAGA
AAGAAGAGGCTGTGCATTAAGTTTATCCCACGGGATTCAACGGAAGCCGCAATTTGTGAC
ATTCGGATCATGGGCCGGACCAAGCAGGCCCCCCCTCAGTACACATTCATTGGGGAACTG
AACAGCATGGGGATCTGGTACCGAATGGGCAGAGTACCAAGAAATCATGACTCATCTCAG
CCCACAACGCCGTCCCAGTCATCGGCTGCTCCCACCCCAGCCCCCAACCTTCCCAGGCAC
ATCTCGCTCACGCTCCCTGCTACCTTCCGAGGCAGAAACAGCACTCGGGCTGACTATGAG
TACCAGCACTCCAATCTCTACGCCATATCAGCAATGGATGGTGTGCCTTTTATGATTTCA
GAGAAGTTTTCCTGTGTTCCAGAAAGTATGCAGCCCTTTGATCTCTTGGGAATCACCATC
AAATCTCTGGCAGAAATTGAAAAAGAGGCGGGTTTGGGAAAATGTCCGAGCTGCTTCATG
ACTTAGAGACAGGATCAGGACACATTCTGCTGCGCTTGATAAGGCAAACCCCACTGGCAG
CCTGGCTCGAAAGAGTTTGGATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTCAGCTGCCAAGTGGGAGTGAGAGCTGCGCTTCTGCACCCGCGTTGCTTCAGGGACGC
AGCGGTGGGAAAAGCACCAGCACCAGGGGTTCGCGCTTTAATCCATTGGAACTTCTTCCT
TGTGGACAGTGTGAGGAGCGATCCACCATGCCTGAAGTCAAAGACCTTTCGGAAGCCTTG
CCAGAGACGTCCATGGATCCCATCACGGGAGTGGGAGTGGTGGCTTCTCGGAACCGAGCC
CCAACAGGCTACGACGTAGTTGCGCAGACAGCAGATGGCGTGGATGCTGACCTCTGGAAA
GACGGCTTATTTAAATCCAAGGTTACCAGATACCTGTGTTTCACAAGATCATTTTCCAAA
GAAAATAGTCATTTAGGGAACGTGCTAGTGGATATGAAGCTCATTGACATCAAGGACACT
CTGCCTGTAGGCTTCATCCCGATTCAGGAGACCGTGGACACACAGGAAGTGGCTTTTAGA
AAGAAGAGGCTGTGCATTAAGTTTATCCCACGGGATTCAACGGAAGCCGCAATTTGTGAC
ATTCGGATCATGGGCCGGACCAAGCAGGCCCCCCCTCAGTACACATTCATTGGGGAACTG
AACAGCATGGGGATCTGGTACCGAATGGGCAGAGTACCAAGAAATCATGACTCATCTCAG
CCCACAACGCCGTCCCAGTCATCGGCTGCTCCCACCCCAGCCCCCAACCTTCCCAGGCAC
ATCTCGCTCACGCTCCCTGCTACCTTCCGAGGCAGAAACAGCACTCGGGCTGACTATGAG
TACCAGCACTCCAATCTCTACGCCATATCAGCAATGGATGGTGTGCCTTTTATGATTTCA
GAGAAGTTTTCCTGTGTTCCAGAAAGTATGCAGCCCTTTGATCTCTTGGGAATCACCATC
AAATCTCTGGCAGAAATTGAAAAAGAGGCGGGTTTGGGAAAATGTCCGAGCTGCTTCATG
ACTTAGAGACAGGATCAGGACACATTCTGCTGCGCTTGATAAGGCAAACCCCACTGGCAG
CCTGGCTCGAAAGAGTTTGGATGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|26352770|dbj|BAC40015.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26352770|dbj|BAC40015.1|

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               719-927, gnl|bosTau2|chr19 (54215844-54215637)
               

               
               719-927, gnl|hg17|chr17 (67015365-67015999)
               

               
               719-927, gnl|Hg17|chr17 (67015368-67015582)
               

               
               719-927, gnl|panTro1|chr19 (70344955-70345599)
               

               
               719-927, gnl|rheMac2|chr16 (66725779-66726414)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               719-927, gnl|bosTau2|chr19 (54215844-54215637)
               

               
               719-927, gnl|hg17|chr17 (67015365-67015999)
               

               
               719-927, gnl|Hg17|chr17 (67015368-67015582)
               

               
               719-927, gnl|panTro1|chr19 (70344955-70345599)
               

               
               719-927, gnl|rheMac2|chr16 (66725779-66726414)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tbr (0.154178)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)

	719-927, gnl\|bosTau2\|chr19 (54215844-54215637)
	719-927, gnl\|hg17\|chr17 (67015365-67015999)
	719-927, gnl\|Hg17\|chr17 (67015368-67015582)
	719-927, gnl\|panTro1\|chr19 (70344955-70345599)
	719-927, gnl\|rheMac2\|chr16 (66725779-66726414)