Non-Coding RNA Search

Ss1.1-Pig4-TMW8023K23.3

Sequence:


               
               TCCATAATGCTGACTACATCTGCCAAATCTCTTTTAAATTGTTAAGTAGAGGACTGTATC
TGTGCCCTTTTTATTGTAGTAGAAGTTATGAAGCTCAGTATAAGAAGTGTTTCTTTTGCA
TTATGTGTGTATATATATATACACATATATATTCAAAAGAACAGGGTAGTTATATGAAAG
ATTACCAAATTGATGGTGAATTTATCAGATACATGCTTTTTTGTGATGCAGATAGTTCTA
AGTATCAGGTAACAGGGTATTCCACTCTTTCTAATCAAGTGAACTTGATAATGCAACATA
ATTCACAAATAACCAGCTGTGCCTGCTTTTATTTTGAGGACCCCGTAGTCACATTATAAA
TCTCTAAGCCAAGGCTTTCAAACAAAATAGTTCTTATAGAAGGAAAAATAATAGAAATAA
GAGGAAGAACTTTAAGGGGAAGATTTTTAAAGTTTTGCCAGTGAAATAAGCATTATATCT
CTAGGTACAGAATATTTTAAGCATTCAAAATTATGTATAATGCATTGGATCTGTTACTTG
GGTGATTGATTAGATTTGAATGTAAGGGGCAATATGCAAGAGTTGGGACCATCGACTGGT
ATGGTGTTGACTTTATTGAACCTATATACTAGCAAATACTTTGTTCCTAAAATTTTTTTT
TAATAGGACTACTCTTTTTAAATGTGCTGTTTAAAATGCTCCAGAATTTATTTTCATTAA
TCTTCACTGACCCTTGTGGAGAAAAATTTCTCTTTTTAACTTGCTTTCCTAAGATTTATT
ATATTTAAACCCGAAAGAAACTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCATAATGCTGACTACATCTGCCAAATCTCTTTTAAATTGTTAAGTAGAGGACTGTATC
TGTGCCCTTTTTATTGTAGTAGAAGTTATGAAGCTCAGTATAAGAAGTGTTTCTTTTGCA
TTATGTGTGTATATATATATACACATATATATTCAAAAGAACAGGGTAGTTATATGAAAG
ATTACCAAATTGATGGTGAATTTATCAGATACATGCTTTTTTGTGATGCAGATAGTTCTA
AGTATCAGGTAACAGGGTATTCCACTCTTTCTAATCAAGTGAACTTGATAATGCAACATA
ATTCACAAATAACCAGCTGTGCCTGCTTTTATTTTGAGGACCCCGTAGTCACATTATAAA
TCTCTAAGCCAAGGCTTTCAAACAAAATAGTTCTTATAGAAGGAAAAATAATAGAAATAA
GAGGAAGAACTTTAAGGGGAAGATTTTTAAAGTTTTGCCAGTGAAATAAGCATTATATCT
CTAGGTACAGAATATTTTAAGCATTCAAAATTATGTATAATGCATTGGATCTGTTACTTG
GGTGATTGATTAGATTTGAATGTAAGGGGCAATATGCAAGAGTTGGGACCATCGACTGGT
ATGGTGTTGACTTTATTGAACCTATATACTAGCAAATACTTTGTTCCTAAAATTTTTTTT
TAATAGGACTACTCTTTTTAAATGTGCTGTTTAAAATGCTCCAGAATTTATTTTCATTAA
TCTTCACTGACCCTTGTGGAGAAAAATTTCTCTTTTTAACTTGCTTTCCTAAGATTTATT
ATATTTAAACCCGAAAGAAACTGT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               145-804, gnl|bosTau2|chr9 (16984416-16985098)
               

               
               145-804, gnl|Hg17|chr6 (117161954-117162725)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               145-804, gnl|bosTau2|chr9 (16984416-16985098)
               

               
               145-804, gnl|Hg17|chr6 (117161954-117162725)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               vin (0.332557)
               

               
               lin (0.145603)
               

               
               kid (0.129735)
               

               
               tra (0.123092)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               lin (0.145603)
               

               
               kid (0.129735)
               

               
               tra (0.123092)

	145-804, gnl\|bosTau2\|chr9 (16984416-16985098)
	145-804, gnl\|Hg17\|chr6 (117161954-117162725)