Ss1.1-Pig4-TMW8023M18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCGCAAGCCATGGAGGGGAACCGGGACGAGGCGGAGAAATGTGTCGAGATCGCCCGGGA GGCCCTGAACGCCGGCAACCGCGAGAAGGCCCAGCGCTTCCTGCAGAAGGCCGAGAAGCT CTACCCGCTGCCCTCGGCCCGCGCACTACTAGAAATAATTATGAAAAATGGAAGCACTGC GGGAAATAGCCCTCATTACCGAAAACCATCAGGTAGTGGGGATCAAAGCAAGCCTAACTG CACAAAGGACAACTCGTCTGGTAGTGGTGAAAGTGGAAAAGGCTACACCAAAGACCAAGT GGATGGAGTTCTCAGGGCTGTAATCACAGCATATGGAAGTTACCAGGCTAGGGGCTGAAC CGGACCTGTAGCTACTGGCCTACACCACAGCCTCAGCAACTCGGAATCCAGGCTACATCT GTGACCTATACCACAGCTCATGGCAATGCCAGATTCTTAACCCACTGATCGAGGCCAGGG ATTGAACCCGCATCCATGGATACTAGTTGGATTCATTACCCCTGAGCTATGATGGGAACT CCCTTAAGTCAGTTTTAAATCAAGTATTGATGTGTTTATATTTTTCTTTTCTTCTTACGT GTTCAGATACTAAACCTTTGATGGTAATATTTTCTCTTTGTGTGACCACAGTGATAAACA GTGATTCCCTAATTGTGGAAAAGTCATGTAAAGGATATTTGGTTAGCATGGGTGATAGTG AAGTACTTTGGGAATATAAATAATGTTGCTAACCACTTTTATGACTGTAGTATTGTGTCA TAGGTACCCAAATAAGTGAGATAATTGAATAAATGAGAGACCTGCTTTTGAAATCTTTAA GAAAAACCATTAAATAGTATGCTGAAGTGTGTTCTGGGAAACCACGTCTCTCCAAAAACA AATTGTATTTTTTTTAGAAATTAACTTTTTATTTGGAGAACATGTTCTCACTGAAAGACC TACATGAAGTTAACTGCGTTATATGTAATTTTTACTTAGATTTATTTTGTGGTCTTTTTT TTTTTTTAGAAAGATGATATAATTACCTATGTATTTGAAAATGTTACCGAAAATGTTACC AAAAAATAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCGCAAGCCATGGAGGGGAACCGGGACGAGGCGGAGAAATGTGTCGAGATCGCCCGGGA GGCCCTGAACGCCGGCAACCGCGAGAAGGCCCAGCGCTTCCTGCAGAAGGCCGAGAAGCT CTACCCGCTGCCCTCGGCCCGCGCACTACTAGAAATAATTATGAAAAATGGAAGCACTGC GGGAAATAGCCCTCATTACCGAAAACCATCAGGTAGTGGGGATCAAAGCAAGCCTAACTG CACAAAGGACAACTCGTCTGGTAGTGGTGAAAGTGGAAAAGGCTACACCAAAGACCAAGT GGATGGAGTTCTCAGGGCTGTAATCACAGCATATGGAAGTTACCAGGCTAGGGGCTGAAC CGGACCTGTAGCTACTGGCCTACACCACAGCCTCAGCAACTCGGAATCCAGGCTACATCT GTGACCTATACCACAGCTCATGGCAATGCCAGATTCTTAACCCACTGATCGAGGCCAGGG ATTGAACCCGCATCCATGGATACTAGTTGGATTCATTACCCCTGAGCTATGATGGGAACT CCCTTAAGTCAGTTTTAAATCAAGTATTGATGTGTTTATATTTTTCTTTTCTTCTTACGT GTTCAGATACTAAACCTTTGATGGTAATATTTTCTCTTTGTGTGACCACAGTGATAAACA GTGATTCCCTAATTGTGGAAAAGTCATGTAAAGGATATTTGGTTAGCATGGGTGATAGTG AAGTACTTTGGGAATATAAATAATGTTGCTAACCACTTTTATGACTGTAGTATTGTGTCA TAGGTACCCAAATAAGTGAGATAATTGAATAAATGAGAGACCTGCTTTTGAAATCTTTAA GAAAAACCATTAAATAGTATGCTGAAGTGTGTTCTGGGAAACCACGTCTCTCCAAAAACA AATTGTATTTTTTTTAGAAATTAACTTTTTATTTGGAGAACATGTTCTCACTGAAAGACC TACATGAAGTTAACTGCGTTATATGTAATTTTTACTTAGATTTATTTTGTGGTCTTTTTT TTTTTTTAGAAAGATGATATAATTACCTATGTATTTGAAAATGTTACCGAAAATGTTACC AAAAAATAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 143-316, gnl|bosTau2|chr6 (9380668-9380841) | |
| 143-316, gnl|canFam2|chr32 (24795180-24795383) | |
| 143-316, gnl|danRer3|chr1 (26433400-26433605) | |
| 143-316, gnl|dasNov1|scaffold_166731 (232-435) | |
| 143-316, gnl|echTel1|scaffold_309047 (20996-20789) | |
| 143-316, gnl|fr1|chrUn (238413274-238413469) | |
| 143-316, gnl|galGal2|chrUn (145725588-145725392) | |
| 143-316, gnl|hg17|chr4 (101208778-101208977) | |
| 143-316, gnl|Hg17|chr4 (101208957-101208784) | |
| 143-316, gnl|loxAfr1|scaffold_15697 (37959-37756) | |
| 143-316, gnl|mm7|chr3 (137693692-137693489) | |
| 143-316, gnl|Mm7|chr3 (137693511-137693684) | |
| 143-316, gnl|monDom2|scaffold_37 (12784153-12783956) | |
| 143-316, gnl|panTro1|chr3 (117586687-117586886) | |
| 143-316, gnl|rheMac2|chr5 (92888325-92888524) | |
| 143-316, gnl|rn3|chr2 (235358223-235358020) | |
| 143-316, gnl|tetNig1|chr18 (6161001-6161200) | |
| 143-316, gnl|xenTro1|scaffold_785 (4767-4963) | |
| 546-872, gnl|bosTau2|chr6 (9382036-9382352) | |
| 546-872, gnl|Hg17|chr4 (101207873-101206716) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 143-316, gnl|bosTau2|chr6 (9380668-9380841) | |
| 143-316, gnl|canFam2|chr32 (24795180-24795383) | |
| 143-316, gnl|danRer3|chr1 (26433400-26433605) | |
| 143-316, gnl|dasNov1|scaffold_166731 (232-435) | |
| 143-316, gnl|echTel1|scaffold_309047 (20996-20789) | |
| 143-316, gnl|fr1|chrUn (238413274-238413469) | |
| 143-316, gnl|galGal2|chrUn (145725588-145725392) | |
| 143-316, gnl|hg17|chr4 (101208778-101208977) | |
| 143-316, gnl|Hg17|chr4 (101208957-101208784) | |
| 143-316, gnl|loxAfr1|scaffold_15697 (37959-37756) | |
| 143-316, gnl|mm7|chr3 (137693692-137693489) | |
| 143-316, gnl|Mm7|chr3 (137693511-137693684) | |
| 143-316, gnl|monDom2|scaffold_37 (12784153-12783956) | |
| 143-316, gnl|panTro1|chr3 (117586687-117586886) | |
| 143-316, gnl|rheMac2|chr5 (92888325-92888524) | |
| 143-316, gnl|rn3|chr2 (235358223-235358020) | |
| 143-316, gnl|tetNig1|chr18 (6161001-6161200) | |
| 143-316, gnl|xenTro1|scaffold_785 (4767-4963) | |
| 546-872, gnl|bosTau2|chr6 (9382036-9382352) | |
| 546-872, gnl|Hg17|chr4 (101207873-101206716) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.118483) |