Ss1.1-Pig4-TMW8024K15.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGACTTAATCAAGTACAACGACAACAGAAAAAATAAGTTTTCAGATAACTATTACCGTGC AGAAATGATTGATGCCCTTGCCAACTCTGTTACGCCTGCAGTCAGTGTGAATAATGAAGT TCGAACTTTGGACAACTTAAATCCAGATGTGCGACTCATTCTTGAAGAAATCACCAGGTT TTTGAATATGGAGAAACTTCTTCCAAGTTATAGACACACCATCACTGTCAGTTGTTTGAG AGCCATACGAGTGCTTCAGAAAAATGGGCACGTGCCGAGCGATCCATCTCTTTTTAAATC TTATGCAGAATACGGCCATTTTGTGGACATAAGGATAGCAGCTTTGGAAGCAGTTGTTGA TTATACTAAAGTGGACAGGAGTTATGAAGAACTGCAGTGGCTGCTTAATATGATTCAAAA TGACCCTGTACCCTATGTAAGACATAAGATTCTAAACATGTTGACTAAGAACCCACCATT TACTAAAAACATGGAGTCTCCCTTATGCAATGAAGCTTTGGTAGATCAACTCTGGAAACT TATGAATTCCGGTACTTCCCATGACTGGAGATTACGGTGTGGTGCTGTGGACTTGTACTT CACACTTTTTGGCCTCAGTAGACCTTCCTGCTTACCCTTGCCAGAACTCGGCTTGGTCCT TAATCTGAAAGAGAAAAAAGCTGTCTTGAATCCGACCATAATTCCAGAGGCCATAGCAGG CAACCAAGAGACTGCAGTTAATCCAAGCAGTCACGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGACTTAATCAAGTACAACGACAACAGAAAAAATAAGTTTTCAGATAACTATTACCGTGC AGAAATGATTGATGCCCTTGCCAACTCTGTTACGCCTGCAGTCAGTGTGAATAATGAAGT TCGAACTTTGGACAACTTAAATCCAGATGTGCGACTCATTCTTGAAGAAATCACCAGGTT TTTGAATATGGAGAAACTTCTTCCAAGTTATAGACACACCATCACTGTCAGTTGTTTGAG AGCCATACGAGTGCTTCAGAAAAATGGGCACGTGCCGAGCGATCCATCTCTTTTTAAATC TTATGCAGAATACGGCCATTTTGTGGACATAAGGATAGCAGCTTTGGAAGCAGTTGTTGA TTATACTAAAGTGGACAGGAGTTATGAAGAACTGCAGTGGCTGCTTAATATGATTCAAAA TGACCCTGTACCCTATGTAAGACATAAGATTCTAAACATGTTGACTAAGAACCCACCATT TACTAAAAACATGGAGTCTCCCTTATGCAATGAAGCTTTGGTAGATCAACTCTGGAAACT TATGAATTCCGGTACTTCCCATGACTGGAGATTACGGTGTGGTGCTGTGGACTTGTACTT CACACTTTTTGGCCTCAGTAGACCTTCCTGCTTACCCTTGCCAGAACTCGGCTTGGTCCT TAATCTGAAAGAGAAAAAAGCTGTCTTGAATCCGACCATAATTCCAGAGGCCATAGCAGG CAACCAAGAGACTGCAGTTAATCCAAGCAGTCACGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 36-231, gnl|bosTau2|chr14 (50009208-50009403) | |
| 36-231, gnl|canFam2|chr13 (21813125-21813333) | |
| 36-231, gnl|danRer3|chrUn (118570935-118570716) | |
| 36-231, gnl|dasNov1|scaffold_48275 (6656-6447) | |
| 36-231, gnl|echTel1|scaffold_319804 (49788-49997) | |
| 36-231, gnl|fr1|chrUn (233221204-233221411) | |
| 36-231, gnl|galGal2|chr2 (147187362-147187153) | |
| 36-231, gnl|hg17|chr8 (120843835-120844044) | |
| 36-231, gnl|Hg17|chr8 (120844031-120843836) | |
| 36-231, gnl|loxAfr1|scaffold_6864 (26533-26324) | |
| 36-231, gnl|mm7|chr15 (55098358-55098567) | |
| 36-231, gnl|Mm7|chr15 (55098554-55098359) | |
| 36-231, gnl|monDom2|scaffold_3 (35989144-35988935) | |
| 36-231, gnl|oryCun1|scaffold_172231 (3488-3690) | |
| 36-231, gnl|panTro1|chr7 (123477754-123477963) | |
| 36-231, gnl|rheMac2|chr8 (122264026-122264235) | |
| 36-231, gnl|rn3|chr7 (91599367-91599576) | |
| 36-231, gnl|tetNig1|chrUn_random (128574146-128574346) | |
| 36-231, gnl|xenTro1|scaffold_330 (785199-784990) | |
| 551-754, gnl|bosTau2|chr14 (50021870-50022073) | |
| 551-754, gnl|Hg17|chr8 (120828356-120828153) | |
| 551-754, gnl|Mm7|chr15 (55088668-55088465) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 36-231, gnl|bosTau2|chr14 (50009208-50009403) | |
| 36-231, gnl|canFam2|chr13 (21813125-21813333) | |
| 36-231, gnl|danRer3|chrUn (118570935-118570716) | |
| 36-231, gnl|dasNov1|scaffold_48275 (6656-6447) | |
| 36-231, gnl|echTel1|scaffold_319804 (49788-49997) | |
| 36-231, gnl|fr1|chrUn (233221204-233221411) | |
| 36-231, gnl|galGal2|chr2 (147187362-147187153) | |
| 36-231, gnl|hg17|chr8 (120843835-120844044) | |
| 36-231, gnl|Hg17|chr8 (120844031-120843836) | |
| 36-231, gnl|loxAfr1|scaffold_6864 (26533-26324) | |
| 36-231, gnl|mm7|chr15 (55098358-55098567) | |
| 36-231, gnl|Mm7|chr15 (55098554-55098359) | |
| 36-231, gnl|monDom2|scaffold_3 (35989144-35988935) | |
| 36-231, gnl|oryCun1|scaffold_172231 (3488-3690) | |
| 36-231, gnl|panTro1|chr7 (123477754-123477963) | |
| 36-231, gnl|rheMac2|chr8 (122264026-122264235) | |
| 36-231, gnl|rn3|chr7 (91599367-91599576) | |
| 36-231, gnl|tetNig1|chrUn_random (128574146-128574346) | |
| 36-231, gnl|xenTro1|scaffold_330 (785199-784990) | |
| 551-754, gnl|bosTau2|chr14 (50021870-50022073) | |
| 551-754, gnl|Hg17|chr8 (120828356-120828153) | |
| 551-754, gnl|Mm7|chr15 (55088668-55088465) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) | |
| tbr (0.154178) |