Non-Coding RNA Search

Ss1.1-Pig4-TMW8024M14.3

Sequence:


               
               TAGGAAACAAGGAAAATATATTTATAGACTGTAAAGTCTTAATGTGCAGAATGTATGAAG
AACTTCTAGAAATCAGTAAGAAAAACTGATAGGCTAATTGCAAAATCATCAAAACATTGA
GCAGACAGTTCACTGAAGAGGAAATATTAGTGATGAATAAAAATATCAAAAGATGCTTAG
ATATTAGTAATTAGGGGAGTGTAAATTAAGATAACAAGGAGGTATCTTTTTTTTTTTTTA
ACCTACCCGTTGCATTAGCAAATATTAAGAAATTTGACAGTGTCAGGTGTTTTGGAGAAT
ATTAATAAATTCTTTCACACTACCTGTTGAGGTAGATATTACGCAAGTACTAATTAATAG
AAGAAAAACTGTTGGTGAGTATTACACAGCAATGGGAATGAATGAGCCACAGTTACTTGC
AAAAACATGGATGAATCTTAAAGATAGGGTACTGAGTGAGAACAACCATTCCTGGAAAAA
TGTATATGATATCTATTTCATAAAGCTTAAAAACAAGCAGTAGTAAATATCTTGTTTAAG
TATACAAGAATAGTGAAAACACCTTTCAAAAAGCAATGGAATAACGATAGCATCAACAAA
ATAATACTTTTCTCTGGAGGATCAGGCCAGGGGGATAGGAAAATTGTAGAACACATGATA
TATGCTAATCAATGGTAATTTGTAGTTCCTGGCTTGAGTGGTAGGTTTATGAATGTTCAA
TATAATATGCTTTATAACTTAACTAGATTGTATATATTTTGTCTTTGAAAAAATAGGGGG
GGGGTTACAAAATAAAGGGAACTGAAAGTGGATATAGTCACCATGCCTGATTCTCTACAA
AAGGGAAGTGACCACAGGTGGATTTGAGGCCAAGAAAAGTGTTGTCCTAACCCCTAAAAA
ACTGGAAGCATGAATGTTTGCTTATAGAATGTTGAAGAAGAGAGTAACTGATAACTATGA
TAACTGATAGGACAGAATGAAGCTCTTGAGAAGATGAGAAGGGTTTGGATCAGAACTCAG
GGAGAGGGGTGTGTAGGGGCAGAGACTCTTCCATTGTAACAAGTGGGAAGATAACAGGTA
GATGTTTCTCCAGTGACTTGAGTATTCTCGTTGTTACTAGATGTTGAGAGATGGAGAGGA
TAAGAAGTTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGGAAACAAGGAAAATATATTTATAGACTGTAAAGTCTTAATGTGCAGAATGTATGAAG
AACTTCTAGAAATCAGTAAGAAAAACTGATAGGCTAATTGCAAAATCATCAAAACATTGA
GCAGACAGTTCACTGAAGAGGAAATATTAGTGATGAATAAAAATATCAAAAGATGCTTAG
ATATTAGTAATTAGGGGAGTGTAAATTAAGATAACAAGGAGGTATCTTTTTTTTTTTTTA
ACCTACCCGTTGCATTAGCAAATATTAAGAAATTTGACAGTGTCAGGTGTTTTGGAGAAT
ATTAATAAATTCTTTCACACTACCTGTTGAGGTAGATATTACGCAAGTACTAATTAATAG
AAGAAAAACTGTTGGTGAGTATTACACAGCAATGGGAATGAATGAGCCACAGTTACTTGC
AAAAACATGGATGAATCTTAAAGATAGGGTACTGAGTGAGAACAACCATTCCTGGAAAAA
TGTATATGATATCTATTTCATAAAGCTTAAAAACAAGCAGTAGTAAATATCTTGTTTAAG
TATACAAGAATAGTGAAAACACCTTTCAAAAAGCAATGGAATAACGATAGCATCAACAAA
ATAATACTTTTCTCTGGAGGATCAGGCCAGGGGGATAGGAAAATTGTAGAACACATGATA
TATGCTAATCAATGGTAATTTGTAGTTCCTGGCTTGAGTGGTAGGTTTATGAATGTTCAA
TATAATATGCTTTATAACTTAACTAGATTGTATATATTTTGTCTTTGAAAAAATAGGGGG
GGGGTTACAAAATAAAGGGAACTGAAAGTGGATATAGTCACCATGCCTGATTCTCTACAA
AAGGGAAGTGACCACAGGTGGATTTGAGGCCAAGAAAAGTGTTGTCCTAACCCCTAAAAA
ACTGGAAGCATGAATGTTTGCTTATAGAATGTTGAAGAAGAGAGTAACTGATAACTATGA
TAACTGATAGGACAGAATGAAGCTCTTGAGAAGATGAGAAGGGTTTGGATCAGAACTCAG
GGAGAGGGGTGTGTAGGGGCAGAGACTCTTCCATTGTAACAAGTGGGAAGATAACAGGTA
GATGTTTCTCCAGTGACTTGAGTATTCTCGTTGTTACTAGATGTTGAGAGATGGAGAGGA
TAAGAAGTTAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               278-610, gnl|bosTau2|chr7 (68378636-68378298)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               278-610, gnl|bosTau2|chr7 (68378636-68378298)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               sag (0.182715)
               

               
               ova (0.129132)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)
               

               
               ova (0.129132)