Ss1.1-Pig4-TMW8025D16.3
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GAACACCTTCTACCTGAAGTTCGTGCTCTGGATGCCGCCCGAGCACTACCTGGTCCTGCT
GCGGCTCGTCTTCTTCGTCAACGTGGGCGGCGTGGCCATGCGGGAGATCTACGACTTCAT
GGACGACCCGAAGCCCCACAAGAAGCTGGGCCAGCAGGCCTGGCTGGTGGCGGCCATCAC
GGTCACCGAGCTGCTCATCGTGGTCAAGTACGACCCGCACACGCTCACGCTCTCGCTGCC
CTTCTACATCTCCCAGTGCTGGACGCTCGGCTCCGTGCTGGCCCTCACCTGGACTGTCTG
GCGCTTCTTCCTGCGGGACATCACGCTGAGGTACAAGGAGACGCGGCGGCAGAAGCAGCA
GAGCAGGGACGGGCAGGCCAGGGCGGACGGCCGCGTGGACAGACACCCGCCTGGGCCCGA
CGACCCCTCGGCGCCCGAGGAGGCCGAGCAGGAGGGGGTGCCGGCCCCGAACTGACACGG
CGCCGCGGCCACGCGGAGCCAGTTGCACCGCCAGGAACCTCCTGCAGCCCTCCGCCCTCG
AGTGTCGTCTTCTCCCGCGTGCGTGCGTGTGTGCGGGCGCACCGTGGGCTCCCGGGGCTC
CGGGCTTGCCCTGGGCAGCCCGGCCCTAGGGAGTGCGTGCCCCTGCCCCTTCCTGCGCAG
TCAGCCCAAAGCCTCGGCCCCTCGGCGCCTCCGAACCACACGGCCTGGCCCAGGAGCACG
GCCACGGCGCCCCCTGCACCCCAGGGCCCTGCCGGCCCCCGGCGGCCCAGCACCCATGAA
GGACGATCGTCCGGGAGCAGCTGAGGCGGCCAAGAAAGGGTGGATCCCTTCCCTGGCCAG
AGGGTGTGAGGACGGGGCCGCCATCGAGTCAGACCCCAAGCCGGTGCCACTGTCGGGAGG
GTGGGTCCTGGGGGTGGCGAGGGTTCCTGACTGCAGAGCTGAGGTCACTTCCACGAGCAG
ACAGAACAAGTAAAAGCCACGGTAATGGCCTGCCGCAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAGGGGGGGGGCCCCCTTTAAATTTTTTTTGGGGGGGGCCAAA
ATTTCCCCCCCCCCTTTTTTTTTAAAAAAAGGGGCC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GAACACCTTCTACCTGAAGTTCGTGCTCTGGATGCCGCCCGAGCACTACCTGGTCCTGCT
GCGGCTCGTCTTCTTCGTCAACGTGGGCGGCGTGGCCATGCGGGAGATCTACGACTTCAT
GGACGACCCGAAGCCCCACAAGAAGCTGGGCCAGCAGGCCTGGCTGGTGGCGGCCATCAC
GGTCACCGAGCTGCTCATCGTGGTCAAGTACGACCCGCACACGCTCACGCTCTCGCTGCC
CTTCTACATCTCCCAGTGCTGGACGCTCGGCTCCGTGCTGGCCCTCACCTGGACTGTCTG
GCGCTTCTTCCTGCGGGACATCACGCTGAGGTACAAGGAGACGCGGCGGCAGAAGCAGCA
GAGCAGGGACGGGCAGGCCAGGGCGGACGGCCGCGTGGACAGACACCCGCCTGGGCCCGA
CGACCCCTCGGCGCCCGAGGAGGCCGAGCAGGAGGGGGTGCCGGCCCCGAACTGACACGG
CGCCGCGGCCACGCGGAGCCAGTTGCACCGCCAGGAACCTCCTGCAGCCCTCCGCCCTCG
AGTGTCGTCTTCTCCCGCGTGCGTGCGTGTGTGCGGGCGCACCGTGGGCTCCCGGGGCTC
CGGGCTTGCCCTGGGCAGCCCGGCCCTAGGGAGTGCGTGCCCCTGCCCCTTCCTGCGCAG
TCAGCCCAAAGCCTCGGCCCCTCGGCGCCTCCGAACCACACGGCCTGGCCCAGGAGCACG
GCCACGGCGCCCCCTGCACCCCAGGGCCCTGCCGGCCCCCGGCGGCCCAGCACCCATGAA
GGACGATCGTCCGGGAGCAGCTGAGGCGGCCAAGAAAGGGTGGATCCCTTCCCTGGCCAG
AGGGTGTGAGGACGGGGCCGCCATCGAGTCAGACCCCAAGCCGGTGCCACTGTCGGGAGG
GTGGGTCCTGGGGGTGGCGAGGGTTCCTGACTGCAGAGCTGAGGTCACTTCCACGAGCAG
ACAGAACAAGTAAAAGCCACGGTAATGGCCTGCCGCAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAGGGGGGGGGCCCCCTTTAAATTTTTTTTGGGGGGGGCCAAA
ATTTCCCCCCCCCCTTTTTTTTTAAAAAAAGGGGCC
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130-316, gnl|bosTau2|chr29 (45681041-45681227) |
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130-316, gnl|canFam2|chr18 (28593071-28593302) |
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130-316, gnl|danRer3|chr16 (50027855-50028049) |
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130-316, gnl|echTel1|scaffold_47083 (670-438) |
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130-316, gnl|fr1|chrUn (166251698-166251918) |
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130-316, gnl|galGal2|chr5 (1961124-1961319) |
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130-316, gnl|hg17|chr11 (479866-480104) |
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130-316, gnl|Hg17|chr11 (479883-480069) |
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130-316, gnl|mm7|chr7 (137572064-137572278) |
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130-316, gnl|Mm7|chr7 (137572074-137572260) |
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130-316, gnl|monDom2|scaffold_35 (22244149-22243957) |
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130-316, gnl|oryCun1|scaffold_140901 (889-1101) |
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130-316, gnl|rheMac2|chr14 (295379-295616) |
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130-316, gnl|rn3|chr1 (201503923-201504137) |
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130-316, gnl|tetNig1|chr13 (8506599-8506808) |
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130-316, gnl|xenTro1|scaffold_146 (1546235-1546001) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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130-316, gnl|bosTau2|chr29 (45681041-45681227) |
|
130-316, gnl|canFam2|chr18 (28593071-28593302) |
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130-316, gnl|danRer3|chr16 (50027855-50028049) |
|
130-316, gnl|echTel1|scaffold_47083 (670-438) |
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130-316, gnl|fr1|chrUn (166251698-166251918) |
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130-316, gnl|galGal2|chr5 (1961124-1961319) |
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130-316, gnl|hg17|chr11 (479866-480104) |
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130-316, gnl|Hg17|chr11 (479883-480069) |
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130-316, gnl|mm7|chr7 (137572064-137572278) |
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130-316, gnl|Mm7|chr7 (137572074-137572260) |
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130-316, gnl|monDom2|scaffold_35 (22244149-22243957) |
|
130-316, gnl|oryCun1|scaffold_140901 (889-1101) |
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130-316, gnl|rheMac2|chr14 (295379-295616) |
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130-316, gnl|rn3|chr1 (201503923-201504137) |
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130-316, gnl|tetNig1|chr13 (8506599-8506808) |
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130-316, gnl|xenTro1|scaffold_146 (1546235-1546001) |
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fcc (0.197785) |
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fty (0.17584) |
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fhi (0.169578) |
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nco (0.161734) |
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pty (0.142714) |
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hlv (0.139256) |
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pla (0.133672) |
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nmm (0.132802) |
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cov (0.132153) |
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eep (0.122564) |
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ebs (0.118301) |
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fcc (0.197785) |
|
fty (0.17584) |
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fhi (0.169578) |
|
nco (0.161734) |
|
pty (0.142714) |
|
hlv (0.139256) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
cov (0.132153) |
|
eep (0.122564) |
|
ebs (0.118301) |
