Ss1.1-Pig4-TMW8025E04.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGTTGGACCGGGCCGGGCCGGACCGGGGAGCGCAGCCGGGGGAGCGGACAGGCGGGCG CGGGCGGAGGCCCGGGCGGGGCGCTGCGGCCGCGGCCATGGCCGACGAGACCCCCAGGAA GGGCAGCTTCTCGGCGCTCGTCGGGCACACCAACGGCCTCACCAAGCCCGCGTCCCTCGC CGCCGCCGCCGTCACCTCCAAGCCCGGGGGCAGCGGCGGCTCCAAGAAGCTCGTGATCAA GAATTTCCGAGACAGACCGAAGTTGCCTGATAACTACACTCAGGACACCTGGCACAAGCT TCACGAGGCGGTGAAAGCCATACAGAGTAGTACCTCCATCAGATACAACCTGGAAGAGCT CTACCAGCTGTCCAAACCACACGGTTGTGCACTTCCACGAAATGTGACACGGGTGCGGAT TCCGTGGGCCTCAGTATTGTCTCAGCGAAGGAAATACTAGAAATCCAAGTACAGGCCTCC GGCAGAAACAGTGGGAGTTCTGCGAGAGGACGTCCCCAGGGTCAAGGAGGATTTTCGGGT TTTGGCGCTTGTGGGATTTTTATTTTCTTTTCAGGCTTCAACTGTCTAGAAAGGCATTTA AAGTTAATTCATCACAGGAAAGCCATATGTTTCTGTGAGCCATGCGACTCTGTTTTCCAA ATATGCAGCAAATGTTATTAAAATTCCAAGTTACGTTATATATAAAATTCTCATGACAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGTTGGACCGGGCCGGGCCGGACCGGGGAGCGCAGCCGGGGGAGCGGACAGGCGGGCG CGGGCGGAGGCCCGGGCGGGGCGCTGCGGCCGCGGCCATGGCCGACGAGACCCCCAGGAA GGGCAGCTTCTCGGCGCTCGTCGGGCACACCAACGGCCTCACCAAGCCCGCGTCCCTCGC CGCCGCCGCCGTCACCTCCAAGCCCGGGGGCAGCGGCGGCTCCAAGAAGCTCGTGATCAA GAATTTCCGAGACAGACCGAAGTTGCCTGATAACTACACTCAGGACACCTGGCACAAGCT TCACGAGGCGGTGAAAGCCATACAGAGTAGTACCTCCATCAGATACAACCTGGAAGAGCT CTACCAGCTGTCCAAACCACACGGTTGTGCACTTCCACGAAATGTGACACGGGTGCGGAT TCCGTGGGCCTCAGTATTGTCTCAGCGAAGGAAATACTAGAAATCCAAGTACAGGCCTCC GGCAGAAACAGTGGGAGTTCTGCGAGAGGACGTCCCCAGGGTCAAGGAGGATTTTCGGGT TTTGGCGCTTGTGGGATTTTTATTTTCTTTTCAGGCTTCAACTGTCTAGAAAGGCATTTA AAGTTAATTCATCACAGGAAAGCCATATGTTTCTGTGAGCCATGCGACTCTGTTTTCCAA ATATGCAGCAAATGTTATTAAAATTCCAAGTTACGTTATATATAAAATTCTCATGACAGC |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 250-367, gnl|bosTau2|chr12 (46797594-46797477) | |
| 250-367, gnl|canFam2|chr22 (63583770-63583851) | |
| 250-367, gnl|danRer3|chr20 (25956576-25956495) | |
| 250-367, gnl|dasNov1|scaffold_28485 (3363-3444) | |
| 250-367, gnl|echTel1|scaffold_283650 (2622-2543) | |
| 250-367, gnl|fr1|chrUn (163032176-163032097) | |
| 250-367, gnl|galGal2|chrUn (77388334-77388415) | |
| 250-367, gnl|hg17|chr13 (112912284-112912365) | |
| 250-367, gnl|Hg17|chr13 (112912286-112912403) | |
| 250-367, gnl|loxAfr1|scaffold_67329 (8201-8282) | |
| 250-367, gnl|mm7|chr8 (13080410-13080491) | |
| 250-367, gnl|Mm7|chr8 (13080412-13080529) | |
| 250-367, gnl|monDom2|scaffold_11 (32206349-32206268) | |
| 250-367, gnl|oryCun1|scaffold_177558 (23593-23674) | |
| 250-367, gnl|panTro1|chr14_random (2830642-2830723) | |
| 250-367, gnl|rheMac2|chrX (118764592-118764514) | |
| 250-367, gnl|rn3|chr16 (81279315-81279234) | |
| 250-367, gnl|tetNig1|chr5 (8304805-8304726) | |
| 250-367, gnl|xenTro1|scaffold_3369 (19154-19209) | |
| 444-711, gnl|bosTau2|chr12 (46797278-46797024) | |
| 444-711, gnl|Hg17|chr13 (112912494-112912728) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 250-367, gnl|bosTau2|chr12 (46797594-46797477) | |
| 250-367, gnl|canFam2|chr22 (63583770-63583851) | |
| 250-367, gnl|danRer3|chr20 (25956576-25956495) | |
| 250-367, gnl|dasNov1|scaffold_28485 (3363-3444) | |
| 250-367, gnl|echTel1|scaffold_283650 (2622-2543) | |
| 250-367, gnl|fr1|chrUn (163032176-163032097) | |
| 250-367, gnl|galGal2|chrUn (77388334-77388415) | |
| 250-367, gnl|hg17|chr13 (112912284-112912365) | |
| 250-367, gnl|Hg17|chr13 (112912286-112912403) | |
| 250-367, gnl|loxAfr1|scaffold_67329 (8201-8282) | |
| 250-367, gnl|mm7|chr8 (13080410-13080491) | |
| 250-367, gnl|Mm7|chr8 (13080412-13080529) | |
| 250-367, gnl|monDom2|scaffold_11 (32206349-32206268) | |
| 250-367, gnl|oryCun1|scaffold_177558 (23593-23674) | |
| 250-367, gnl|panTro1|chr14_random (2830642-2830723) | |
| 250-367, gnl|rheMac2|chrX (118764592-118764514) | |
| 250-367, gnl|rn3|chr16 (81279315-81279234) | |
| 250-367, gnl|tetNig1|chr5 (8304805-8304726) | |
| 250-367, gnl|xenTro1|scaffold_3369 (19154-19209) | |
| 444-711, gnl|bosTau2|chr12 (46797278-46797024) | |
| 444-711, gnl|Hg17|chr13 (112912494-112912728) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| fty (0.17584) | |
| csk (0.140746) | |
| pla (0.133672) | |
| kid (0.129735) | |
| ova (0.129132) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| csk (0.140746) | |
| pla (0.133672) | |
| kid (0.129735) | |
| ova (0.129132) |