Ss1.1-Pig4-TMW8025F23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGTTCCTCAAAGTCATTCAAGCTGTACTCGCCGAAGGAGCCCCCGAACGGCAACGCCTTC CCCCCTTTCCATCCCGGCACCATGCTAGATCGGGATGTGGGCCCAACTCCCATGTACCCG CCTACATACCTGGAGCCTGGGATTGGGAGGCACACACCATATGGCAACCAAACCGACTAC AGAATATTCGAGCTTAACAAACGGCTTCAAAACTGGACAGAGGAGTGTGACAATCTCTGG TGGGATGCTTTCACAACTGAGTTCTTTGAGGATGATGCCATGTTGACCATCACTTTCTGC CTGGAGGATGGACCAAAGAGATACACCATTGGCCGGACCTTGATCCCACGCTACTTCCGC AGCATCTTTGAGGGGGGTGCTACAGAGCTGTACTATGTGCTCAAGCACCCCAAGGAGGCA TTCCACAGCAACTTTGTGTCCCTCGACTGTGACCAGGGCAGCATGGTGACCCAGCACGGC AAACCCATGTTCACCCAGGTATGTGTGGAGGGCCGGTTGTACCTGGAGTTCATGTTTGAT GACATGATGCGGATAAAGACATGGCACTTCAGCATCCGGCAGCACCGGGAGCTCATTCCC CGCAGCATCCTTGCCATGCATGCCCAGGACCCCCAAATGTTGGATCAGCTCTCCAAAAAT ATCACCCGATGTGGGCTGTCCAATTCCACTCTCAACTACCTCCGACTCTGTGTGATACTC GAGCCCATGCAGGAGCTCATGTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGTTCCTCAAAGTCATTCAAGCTGTACTCGCCGAAGGAGCCCCCGAACGGCAACGCCTTC CCCCCTTTCCATCCCGGCACCATGCTAGATCGGGATGTGGGCCCAACTCCCATGTACCCG CCTACATACCTGGAGCCTGGGATTGGGAGGCACACACCATATGGCAACCAAACCGACTAC AGAATATTCGAGCTTAACAAACGGCTTCAAAACTGGACAGAGGAGTGTGACAATCTCTGG TGGGATGCTTTCACAACTGAGTTCTTTGAGGATGATGCCATGTTGACCATCACTTTCTGC CTGGAGGATGGACCAAAGAGATACACCATTGGCCGGACCTTGATCCCACGCTACTTCCGC AGCATCTTTGAGGGGGGTGCTACAGAGCTGTACTATGTGCTCAAGCACCCCAAGGAGGCA TTCCACAGCAACTTTGTGTCCCTCGACTGTGACCAGGGCAGCATGGTGACCCAGCACGGC AAACCCATGTTCACCCAGGTATGTGTGGAGGGCCGGTTGTACCTGGAGTTCATGTTTGAT GACATGATGCGGATAAAGACATGGCACTTCAGCATCCGGCAGCACCGGGAGCTCATTCCC CGCAGCATCCTTGCCATGCATGCCCAGGACCCCCAAATGTTGGATCAGCTCTCCAAAAAT ATCACCCGATGTGGGCTGTCCAATTCCACTCTCAACTACCTCCGACTCTGTGTGATACTC GAGCCCATGCAGGAGCTCATGTCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 221-325, gnl|bosTau2|chr26 (14387532-14387636) | |
| 221-325, gnl|canFam2|chr28 (17650224-17650333) | |
| 221-325, gnl|danRer3|chr13 (28861591-28861700) | |
| 221-325, gnl|dasNov1|scaffold_37482 (8701-8633) | |
| 221-325, gnl|echTel1|scaffold_322801 (146399-146508) | |
| 221-325, gnl|fr1|chrUn (16237819-16237928) | |
| 221-325, gnl|galGal2|chr6 (21630058-21629949) | |
| 221-325, gnl|hg17|chr10 (103860612-103860721) | |
| 221-325, gnl|Hg17|chr10 (103860720-103860616) | |
| 221-325, gnl|loxAfr1|scaffold_213490 (1199-1092) | |
| 221-325, gnl|mm7|chr19 (45932365-45932474) | |
| 221-325, gnl|Mm7|chr19 (45932473-45932369) | |
| 221-325, gnl|monDom2|scaffold_14 (61316160-61316051) | |
| 221-325, gnl|oryCun1|scaffold_200178 (114676-114575) | |
| 221-325, gnl|panTro1|chr8 (105618922-105619031) | |
| 221-325, gnl|rheMac2|chr9 (101765676-101765785) | |
| 221-325, gnl|rn3|chr1 (251517062-251517171) | |
| 221-325, gnl|tetNig1|chrUn_random (27348870-27348761) | |
| 221-325, gnl|xenTro1|scaffold_1153 (205470-205361) | |
| 326-500, gnl|bosTau2|chr26 (14387776-14387950) | |
| 326-500, gnl|canFam2|chr28 (17649882-17650003) | |
| 326-500, gnl|danRer3|chr13 (28861270-28861391) | |
| 326-500, gnl|dasNov1|scaffold_37482 (8874-8755) | |
| 326-500, gnl|echTel1|scaffold_322801 (146105-146226) | |
| 326-500, gnl|fr1|chrUn (16237514-16237635) | |
| 326-500, gnl|galGal2|chr6 (21630434-21630313) | |
| 326-500, gnl|hg17|chr10 (103860275-103860396) | |
| 326-500, gnl|Hg17|chr10 (103860448-103860274) | |
| 326-500, gnl|loxAfr1|scaffold_366 (71789-71679) | |
| 326-500, gnl|mm7|chr19 (45932054-45932175) | |
| 326-500, gnl|Mm7|chr19 (45932227-45932053) | |
| 326-500, gnl|monDom2|scaffold_14 (61316448-61316327) | |
| 326-500, gnl|oryCun1|scaffold_204270 (42213-42092) | |
| 326-500, gnl|panTro1|chr8 (105618585-105618706) | |
| 326-500, gnl|rheMac2|chr9 (101765339-101765460) | |
| 326-500, gnl|rn3|chr1 (251516766-251516887) | |
| 326-500, gnl|tetNig1|chrUn_random (27349642-27349521) | |
| 326-500, gnl|xenTro1|scaffold_1153 (206910-206789) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 221-325, gnl|bosTau2|chr26 (14387532-14387636) | |
| 221-325, gnl|canFam2|chr28 (17650224-17650333) | |
| 221-325, gnl|danRer3|chr13 (28861591-28861700) | |
| 221-325, gnl|dasNov1|scaffold_37482 (8701-8633) | |
| 221-325, gnl|echTel1|scaffold_322801 (146399-146508) | |
| 221-325, gnl|fr1|chrUn (16237819-16237928) | |
| 221-325, gnl|galGal2|chr6 (21630058-21629949) | |
| 221-325, gnl|hg17|chr10 (103860612-103860721) | |
| 221-325, gnl|Hg17|chr10 (103860720-103860616) | |
| 221-325, gnl|loxAfr1|scaffold_213490 (1199-1092) | |
| 221-325, gnl|mm7|chr19 (45932365-45932474) | |
| 221-325, gnl|Mm7|chr19 (45932473-45932369) | |
| 221-325, gnl|monDom2|scaffold_14 (61316160-61316051) | |
| 221-325, gnl|oryCun1|scaffold_200178 (114676-114575) | |
| 221-325, gnl|panTro1|chr8 (105618922-105619031) | |
| 221-325, gnl|rheMac2|chr9 (101765676-101765785) | |
| 221-325, gnl|rn3|chr1 (251517062-251517171) | |
| 221-325, gnl|tetNig1|chrUn_random (27348870-27348761) | |
| 221-325, gnl|xenTro1|scaffold_1153 (205470-205361) | |
| 326-500, gnl|bosTau2|chr26 (14387776-14387950) | |
| 326-500, gnl|canFam2|chr28 (17649882-17650003) | |
| 326-500, gnl|danRer3|chr13 (28861270-28861391) | |
| 326-500, gnl|dasNov1|scaffold_37482 (8874-8755) | |
| 326-500, gnl|echTel1|scaffold_322801 (146105-146226) | |
| 326-500, gnl|fr1|chrUn (16237514-16237635) | |
| 326-500, gnl|galGal2|chr6 (21630434-21630313) | |
| 326-500, gnl|hg17|chr10 (103860275-103860396) | |
| 326-500, gnl|Hg17|chr10 (103860448-103860274) | |
| 326-500, gnl|loxAfr1|scaffold_366 (71789-71679) | |
| 326-500, gnl|mm7|chr19 (45932054-45932175) | |
| 326-500, gnl|Mm7|chr19 (45932227-45932053) | |
| 326-500, gnl|monDom2|scaffold_14 (61316448-61316327) | |
| 326-500, gnl|oryCun1|scaffold_204270 (42213-42092) | |
| 326-500, gnl|panTro1|chr8 (105618585-105618706) | |
| 326-500, gnl|rheMac2|chr9 (101765339-101765460) | |
| 326-500, gnl|rn3|chr1 (251516766-251516887) | |
| 326-500, gnl|tetNig1|chrUn_random (27349642-27349521) | |
| 326-500, gnl|xenTro1|scaffold_1153 (206910-206789) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) | |
| nco (0.161734) |