Non-Coding RNA Search

Ss1.1-Pig4-TMW8025G09.3

Sequence:


               
               GTGAATCCTACCCAATGGCAGCAGAAAATTGCCATGAAAATGGAACTGCTTGGATGTCAG
TTTATTCCTAAAGGTAAAGCAACAGTGTGTTTAAGACATGTTGTTTTCACTGGCTTAATT
AAAAATTACATGGCTCTTCTCAGAGAAATTAATTAGTAAGGGTGTAAGTGTTTATCCTCT
AGATTCAGTATCTTCGAAAAGGTATTTTTAAAAAGAAATAGTTATCCCTATTGAATATAA
TTTTAGATATCTAACTGGTTTCCACAATTGCAGGTGGAAGAAGAAAGAGGGCATCTCTGA
TGAGACAATGCAATGAGATTGCTTTCCAAACAGAGTCTCAATCTTGACAGTTTTTAATCA
AGTTCTATGTAGTATAATATTTGTATCCCATAAGCACTGATGACCGTAACAGTCACCTTA
GTCTAAGTGCCTTTTACTTTGAATAAATTAAAAGTGGGAATAACTTCCTTTGAAATTATA
TAATATTTTAGTACTTTGTTTGCTTGTGTCCCTCAAAACTACCACAGTGCTGACACATAG
TGGGCCCTCTATAAGTAGTTATTAAAGGAATTGAGTAAGTCGTATATCATATTGTGACAT
TTTTATGGCTTTACCATTCAACGGCATCTGCCTCCCTGTTATTTTCCTTCCTAAGATTAT
TTTCAGACAGTTTAACTATTTAAAAATTCAGAACTCCCAGTATATTTGTGCATTTAATGC
AGAGTGTATTTATCCTTCTGACATATTTCTGAGAATTAAAATTACCTTGCAGAAATAAGT
ATGCTGGGAAATCTTAAAGACATTTAAAATCACTATTTTTAATTATGATTTTTATAAGCA
AAATGTATAAATTTTTCTAAACCATTTTTCAAGGTCGTTCTCCAAAACTTACTCAACCTC
CACCTCCTCGGAGCAACAAAGACCTCAAAAACACTACAGCCCTTCCAAAAATAGCCAAAG
GTCATGCCCCCAAATTTACTCAACCACTACAACCTCGAAGTAGCAATGAATTTCCTGTAC
GTACAGAGCAAACAACTGCCACTCCTGAAATCAAAAATACTACTGTAACGCCAAACGTAA
CCAAAGACGTAGCCTTGGCCGCGGTGCTGGTCCCTGTGCTGGTCATGGTCCTCACCACTC
TCATCCTCATACTGGTGTGTGCTTGGCACTGGAGAAACAGGAAGAAAAAAACTGAAGGCA
CATATGACTTACCTTATTGGGACCGAGCAGGCTGGTGGAAAGGAATGAAGCAGTTTCTCC
CTGCCAGATCAGTGGAGCATGAGGAAACCCCAGTCCGCTACAGCAGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAATCCTACCCAATGGCAGCAGAAAATTGCCATGAAAATGGAACTGCTTGGATGTCAG
TTTATTCCTAAAGGTAAAGCAACAGTGTGTTTAAGACATGTTGTTTTCACTGGCTTAATT
AAAAATTACATGGCTCTTCTCAGAGAAATTAATTAGTAAGGGTGTAAGTGTTTATCCTCT
AGATTCAGTATCTTCGAAAAGGTATTTTTAAAAAGAAATAGTTATCCCTATTGAATATAA
TTTTAGATATCTAACTGGTTTCCACAATTGCAGGTGGAAGAAGAAAGAGGGCATCTCTGA
TGAGACAATGCAATGAGATTGCTTTCCAAACAGAGTCTCAATCTTGACAGTTTTTAATCA
AGTTCTATGTAGTATAATATTTGTATCCCATAAGCACTGATGACCGTAACAGTCACCTTA
GTCTAAGTGCCTTTTACTTTGAATAAATTAAAAGTGGGAATAACTTCCTTTGAAATTATA
TAATATTTTAGTACTTTGTTTGCTTGTGTCCCTCAAAACTACCACAGTGCTGACACATAG
TGGGCCCTCTATAAGTAGTTATTAAAGGAATTGAGTAAGTCGTATATCATATTGTGACAT
TTTTATGGCTTTACCATTCAACGGCATCTGCCTCCCTGTTATTTTCCTTCCTAAGATTAT
TTTCAGACAGTTTAACTATTTAAAAATTCAGAACTCCCAGTATATTTGTGCATTTAATGC
AGAGTGTATTTATCCTTCTGACATATTTCTGAGAATTAAAATTACCTTGCAGAAATAAGT
ATGCTGGGAAATCTTAAAGACATTTAAAATCACTATTTTTAATTATGATTTTTATAAGCA
AAATGTATAAATTTTTCTAAACCATTTTTCAAGGTCGTTCTCCAAAACTTACTCAACCTC
CACCTCCTCGGAGCAACAAAGACCTCAAAAACACTACAGCCCTTCCAAAAATAGCCAAAG
GTCATGCCCCCAAATTTACTCAACCACTACAACCTCGAAGTAGCAATGAATTTCCTGTAC
GTACAGAGCAAACAACTGCCACTCCTGAAATCAAAAATACTACTGTAACGCCAAACGTAA
CCAAAGACGTAGCCTTGGCCGCGGTGCTGGTCCCTGTGCTGGTCATGGTCCTCACCACTC
TCATCCTCATACTGGTGTGTGCTTGGCACTGGAGAAACAGGAAGAAAAAAACTGAAGGCA
CATATGACTTACCTTATTGGGACCGAGCAGGCTGGTGGAAAGGAATGAAGCAGTTTCTCC
CTGCCAGATCAGTGGAGCATGAGGAAACCCCAGTCCGCTACAGCAGTA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-971, gnl|bosTau2|chr1 (22662738-22661752)
               

               
               1-971, gnl|Hg17|chr3 (100013938-100012992)
               

               
               1-971, gnl|Mm7|chr16 (58391359-58392322)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-971, gnl|bosTau2|chr1 (22662738-22661752)
               

               
               1-971, gnl|Hg17|chr3 (100013938-100012992)
               

               
               1-971, gnl|Mm7|chr16 (58391359-58392322)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               elu (0.385356)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)

	1-971, gnl\|bosTau2\|chr1 (22662738-22661752)
	1-971, gnl\|Hg17\|chr3 (100013938-100012992)
	1-971, gnl\|Mm7\|chr16 (58391359-58392322)