Ss1.1-Pig4-TMW8025I06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTGTTTAATTATCTTTAACCAGCTTGGTTCCCCTTCTTGCAAGGGGACGCCTACTCTAA TGAAATGTTTGGAAAGAAAGACGGAGAGTTCCCGTTGTGGCTCAGCGGCTGCTACCATGA GGTTAAATCAGAACACCTTGCTTCTGGGAAAGAAGGTGGTGCTGGTACCCTACACCCCGG AGCATGTGCCTAGGTACCATGAGTGGATGAAATCAGAGGAGCTGCAGCGCTGCAGAGAAG TGGCAGGGCCAGCCAGGCCCCAGTGAAGAGAGCTGCATGGCTGGAGACGTGAACCTCTTC CTCACAGATCTATCATCGTGCTGGCTGGGGGAGATTGAGGTCATGATTCAGGCCCCAGTG AAGAGAGCTGCATGGCTGGAGACGTGAACCTCTTCCTCACAGATCTAGGGGACCCCTCCC TGGGGGAGATTGAGGTCATGATTGTAGAGCCCAGCTGCAGGGGCCAGGGCTTGGGCACCG AGGCCGTCCTCATGATGATGGCTTACGGAGTCACCAAGCTAGGTCTGACCACGTTTGAGG CTAAAATTGGGCAAGAAAATGAACCCAGCATCCGGATGTTCCGCAGGCTGCACTTTGAGC AGGTGGCCGTGAGCAGTGTCTTCCAGGAGGTGACACTCAGGCTGACAATGAGTGAGCCGG AGCGGCAGTGGCTTCTGGAGCAGACCAGCCATGTGCAAGAGAAGCCCTACAGAGATGGGT CCTCAGAGCCCCACTGACAGCTGGCCTCGTGGCCTGGCCACCCTGTGTGAACGGGAGTGT AAGACCAGGCTCCTGCCACAGGAGAATGGAGGGAGCCTCGGGGGCAGATACTCTGGGCCC TGCTCCAGGTTGGAAATCTTTTGGGGGCCCTTCAGACCCTGGGCTGGACTTGCTTGGCCT CCCTTGTCTGGCAGCGTGGCTGAGCCCCTCCAGGGCCAGCCCCTGCTCCTGGCCAACCCT GGACTCTCGGAACCTGGAGCGGATGGCATGAATCCATGGCAGAGGCCAGGGTAGGCGTGG AGCCAGAGTTGAGGGAGGGGCCTGGTGAACAGGCAAGACTTCCTTTTCGCCTGGAAGGCC GGAGGGGCCACCGAGCCTCTGGCCAGGAGTAAAGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTGTTTAATTATCTTTAACCAGCTTGGTTCCCCTTCTTGCAAGGGGACGCCTACTCTAA TGAAATGTTTGGAAAGAAAGACGGAGAGTTCCCGTTGTGGCTCAGCGGCTGCTACCATGA GGTTAAATCAGAACACCTTGCTTCTGGGAAAGAAGGTGGTGCTGGTACCCTACACCCCGG AGCATGTGCCTAGGTACCATGAGTGGATGAAATCAGAGGAGCTGCAGCGCTGCAGAGAAG TGGCAGGGCCAGCCAGGCCCCAGTGAAGAGAGCTGCATGGCTGGAGACGTGAACCTCTTC CTCACAGATCTATCATCGTGCTGGCTGGGGGAGATTGAGGTCATGATTCAGGCCCCAGTG AAGAGAGCTGCATGGCTGGAGACGTGAACCTCTTCCTCACAGATCTAGGGGACCCCTCCC TGGGGGAGATTGAGGTCATGATTGTAGAGCCCAGCTGCAGGGGCCAGGGCTTGGGCACCG AGGCCGTCCTCATGATGATGGCTTACGGAGTCACCAAGCTAGGTCTGACCACGTTTGAGG CTAAAATTGGGCAAGAAAATGAACCCAGCATCCGGATGTTCCGCAGGCTGCACTTTGAGC AGGTGGCCGTGAGCAGTGTCTTCCAGGAGGTGACACTCAGGCTGACAATGAGTGAGCCGG AGCGGCAGTGGCTTCTGGAGCAGACCAGCCATGTGCAAGAGAAGCCCTACAGAGATGGGT CCTCAGAGCCCCACTGACAGCTGGCCTCGTGGCCTGGCCACCCTGTGTGAACGGGAGTGT AAGACCAGGCTCCTGCCACAGGAGAATGGAGGGAGCCTCGGGGGCAGATACTCTGGGCCC TGCTCCAGGTTGGAAATCTTTTGGGGGCCCTTCAGACCCTGGGCTGGACTTGCTTGGCCT CCCTTGTCTGGCAGCGTGGCTGAGCCCCTCCAGGGCCAGCCCCTGCTCCTGGCCAACCCT GGACTCTCGGAACCTGGAGCGGATGGCATGAATCCATGGCAGAGGCCAGGGTAGGCGTGG AGCCAGAGTTGAGGGAGGGGCCTGGTGAACAGGCAAGACTTCCTTTTCGCCTGGAAGGCC GGAGGGGCCACCGAGCCTCTGGCCAGGAGTAAAGCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 294-447, gnl|bosTau2|chr19 (51898736-51898891) | |
| 294-447, gnl|canFam2|chr9 (8657227-8657053) | |
| 294-447, gnl|danRer3|chr12 (28262373-28262220) | |
| 294-447, gnl|dasNov1|scaffold_49240 (8066-7892) | |
| 294-447, gnl|echTel1|scaffold_306878 (432-604) | |
| 294-447, gnl|fr1|chrUn (284660502-284660648) | |
| 294-447, gnl|galGal2|chr3_random (1150420-1150586) | |
| 294-447, gnl|hg17|chr17 (70280611-70280784) | |
| 294-447, gnl|Hg17|chr17 (70280785-70280630) | |
| 294-447, gnl|loxAfr1|scaffold_9733 (5518-5692) | |
| 294-447, gnl|mm7|chr11 (115293511-115293683) | |
| 294-447, gnl|Mm7|chr11 (115293685-115293528) | |
| 294-447, gnl|monDom2|scaffold_18 (31891294-31891467) | |
| 294-447, gnl|oryCun1|scaffold_113338 (3960-4132) | |
| 294-447, gnl|panTro1|chr19 (73626141-73626314) | |
| 294-447, gnl|rheMac2|chr16 (70045758-70045931) | |
| 294-447, gnl|rn3|chr10 (105273288-105273462) | |
| 294-447, gnl|tetNig1|chrUn_random (130563216-130563071) | |
| 601-796, gnl|bosTau2|chr19 (51899890-51900084) | |
| 601-796, gnl|Hg17|chr17 (70279594-70279383) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 294-447, gnl|bosTau2|chr19 (51898736-51898891) | |
| 294-447, gnl|canFam2|chr9 (8657227-8657053) | |
| 294-447, gnl|danRer3|chr12 (28262373-28262220) | |
| 294-447, gnl|dasNov1|scaffold_49240 (8066-7892) | |
| 294-447, gnl|echTel1|scaffold_306878 (432-604) | |
| 294-447, gnl|fr1|chrUn (284660502-284660648) | |
| 294-447, gnl|galGal2|chr3_random (1150420-1150586) | |
| 294-447, gnl|hg17|chr17 (70280611-70280784) | |
| 294-447, gnl|Hg17|chr17 (70280785-70280630) | |
| 294-447, gnl|loxAfr1|scaffold_9733 (5518-5692) | |
| 294-447, gnl|mm7|chr11 (115293511-115293683) | |
| 294-447, gnl|Mm7|chr11 (115293685-115293528) | |
| 294-447, gnl|monDom2|scaffold_18 (31891294-31891467) | |
| 294-447, gnl|oryCun1|scaffold_113338 (3960-4132) | |
| 294-447, gnl|panTro1|chr19 (73626141-73626314) | |
| 294-447, gnl|rheMac2|chr16 (70045758-70045931) | |
| 294-447, gnl|rn3|chr10 (105273288-105273462) | |
| 294-447, gnl|tetNig1|chrUn_random (130563216-130563071) | |
| 601-796, gnl|bosTau2|chr19 (51899890-51900084) | |
| 601-796, gnl|Hg17|chr17 (70279594-70279383) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| fce (0.271592) | |
| eje (0.197668) | |
| cki (0.165235) | |
| cag (0.151194) | |
| ese (0.126502) | |
| cly (0.120642) | |
| eru (0.120048) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| eje (0.197668) | |
| cki (0.165235) | |
| cag (0.151194) | |
| ese (0.126502) | |
| cly (0.120642) | |
| eru (0.120048) |