Non-Coding RNA Search

Ss1.1-Pig4-TMW8025L11.3

Sequence:


               
               AAGAACCTGAAAGCTTCTACCAGTTCCGAGGCGTCATGCATCAGGTGATGGCGCTGGACA
GCGAGGCGCTCAGGATACCAAAGCAGTCTCACAGGATTGATACTGATGGATAAAGGGCTT
GAGAAACCGGATTAAAAGGAGGCTGCAAAAAATCATTTCCTGGGAATCTACAAATTTGGA
AGCAGGGAAAATACCCAGACCTGAGGCGTGTTTATTTCGTGTCTCCGTTGGAGGGTGGTG
CCGGATGGGTCACGTGAAGGGGCACGGTCACGGGCACCGCCTCCCCGGGGGGCCAAGCTG
GGACCCGAGCCGCCGCTCTTCCCAAGGATCGAGTCCCCGCAGGCAGGGGCCTCCCCAGGC
CCCTGAGCTCAGGCGCCGGCTGCGCCACCCAGCAGCCCTCGGGCCGCCGTAGGTATTTAT
GAACTTCCTCCCCCCACGCACAGGACTGTGAACTACTTTTCCTAAAACCCACACTGAGCT
CGGCAATCGGATGGAAGGAGGGGCAGTTCCCCCGGGCAGAGCGAGCGGGTCTCCAGATCA
AGTGAGCCTCTGTCCCGTCTGCGTCCAGAGAACCACCTTTTCCTGCTGAAATGTCACTAG
AGGATTGCGTGGGTTTATAAATCTGCTTTTTATCTGAGAACAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAACCTGAAAGCTTCTACCAGTTCCGAGGCGTCATGCATCAGGTGATGGCGCTGGACA
GCGAGGCGCTCAGGATACCAAAGCAGTCTCACAGGATTGATACTGATGGATAAAGGGCTT
GAGAAACCGGATTAAAAGGAGGCTGCAAAAAATCATTTCCTGGGAATCTACAAATTTGGA
AGCAGGGAAAATACCCAGACCTGAGGCGTGTTTATTTCGTGTCTCCGTTGGAGGGTGGTG
CCGGATGGGTCACGTGAAGGGGCACGGTCACGGGCACCGCCTCCCCGGGGGGCCAAGCTG
GGACCCGAGCCGCCGCTCTTCCCAAGGATCGAGTCCCCGCAGGCAGGGGCCTCCCCAGGC
CCCTGAGCTCAGGCGCCGGCTGCGCCACCCAGCAGCCCTCGGGCCGCCGTAGGTATTTAT
GAACTTCCTCCCCCCACGCACAGGACTGTGAACTACTTTTCCTAAAACCCACACTGAGCT
CGGCAATCGGATGGAAGGAGGGGCAGTTCCCCCGGGCAGAGCGAGCGGGTCTCCAGATCA
AGTGAGCCTCTGTCCCGTCTGCGTCCAGAGAACCACCTTTTCCTGCTGAAATGTCACTAG
AGGATTGCGTGGGTTTATAAATCTGCTTTTTATCTGAGAACAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-689, gnl|bosTau2|chr11 (34271672-34270986)
               

               
               2-689, gnl|Hg17|chr1 (6630532-6629439)
               

               
               2-689, gnl|Mm7|chr4 (150969500-150970767)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-689, gnl|bosTau2|chr11 (34271672-34270986)
               

               
               2-689, gnl|Hg17|chr1 (6630532-6629439)
               

               
               2-689, gnl|Mm7|chr4 (150969500-150970767)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pty (0.285429)
               

               
               nje (0.16592)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.285429)
               

               
               nje (0.16592)

	2-689, gnl\|bosTau2\|chr11 (34271672-34270986)
	2-689, gnl\|Hg17\|chr1 (6630532-6629439)
	2-689, gnl\|Mm7\|chr4 (150969500-150970767)