Non-Coding RNA Search

Ss1.1-Pig4-TMW8025L11.5

Sequence:


               
               AAAGGTTGCAAAGATGGCGACGGCCTTGAGCGAGGAGGAGCTGGACAATGAAGACTATTA
CTCGTTGCTGAACGTGCGCAGGGAGGCCTCTTCTGAAGAGCTGAAAGCTGCCTACCGCAG
GCTGTGTATGCTCTACCATCCCGACAAGCACAGAGACCCAGAGCTCAAATCACAGGCGGA
ACGACTGTTTAACCTTGTTCACCAGGCTTATGAAGTGCTCAGCGACCCGCAGACCAGGGC
CATCTATGACATCTATGGCAAGAGAGGACTGGAAATGGAAGGATGGGAGGTTGTGGAAAG
GAGGAGGACTCCAGCCGAAATCAGAGAGGAGTATGAGCGGCTGCAGCGAGAGAGGGAGGA
GAGGCGGCTGCAGCAGCGGACCAACCCCAAGGGGACCATCAGCGTCGGCATCGATGCCAC
CGACCTTTTTGATCGCTACGAGGAGGAGTACGAAGATGTGTCGGGAAGTGGCTTTCCGCA
GATTGAAATTAACAAGATGCACATATCACAGTCCATTGAGGCACCCTTGACCGCTTCAGA
CACAGCCATCCTCTCTGGAAGCCTCTCAACCCAGAATGGGAACGGAGGGGGGTCCATTAA
CTTCGCGCTCAGACGAGTCACTTCTGCAAAGGGATGGGGTGAGTTAGAATTCGGAGCTGG
GGATCTGCAGGGACCTTTATTTGGCCTGAAGCTGTTCCGTAATCTCACACCAAGATGGTA
AATATCAAGAGATCCAGGCTCTTTGCTGGTCTTTGTGGATTTAGGAGACCAGACCCTGTG
TTCTTTTTGTCAGGGTCATCTGGACTTACTGTGTGTGTCCTGCAAGGTCCCTCGGGGCAG
ACCCAGCAGTGCCAGCGCGGAGCCTAGGCGGCGTGCTTGTTGCAAGAGCACCAGGTTGAG
GGGGCATTCCCTGGTGGTCCCGTGGTTAGGATTCGGTGCCTTCACGGCCCAGGCTCAGTC
CCTGGTCTTGGGAACTGAGATCCTGCATCAAGCCTCTCCACACTGGAGGCAAAAACAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGGTTGCAAAGATGGCGACGGCCTTGAGCGAGGAGGAGCTGGACAATGAAGACTATTA
CTCGTTGCTGAACGTGCGCAGGGAGGCCTCTTCTGAAGAGCTGAAAGCTGCCTACCGCAG
GCTGTGTATGCTCTACCATCCCGACAAGCACAGAGACCCAGAGCTCAAATCACAGGCGGA
ACGACTGTTTAACCTTGTTCACCAGGCTTATGAAGTGCTCAGCGACCCGCAGACCAGGGC
CATCTATGACATCTATGGCAAGAGAGGACTGGAAATGGAAGGATGGGAGGTTGTGGAAAG
GAGGAGGACTCCAGCCGAAATCAGAGAGGAGTATGAGCGGCTGCAGCGAGAGAGGGAGGA
GAGGCGGCTGCAGCAGCGGACCAACCCCAAGGGGACCATCAGCGTCGGCATCGATGCCAC
CGACCTTTTTGATCGCTACGAGGAGGAGTACGAAGATGTGTCGGGAAGTGGCTTTCCGCA
GATTGAAATTAACAAGATGCACATATCACAGTCCATTGAGGCACCCTTGACCGCTTCAGA
CACAGCCATCCTCTCTGGAAGCCTCTCAACCCAGAATGGGAACGGAGGGGGGTCCATTAA
CTTCGCGCTCAGACGAGTCACTTCTGCAAAGGGATGGGGTGAGTTAGAATTCGGAGCTGG
GGATCTGCAGGGACCTTTATTTGGCCTGAAGCTGTTCCGTAATCTCACACCAAGATGGTA
AATATCAAGAGATCCAGGCTCTTTGCTGGTCTTTGTGGATTTAGGAGACCAGACCCTGTG
TTCTTTTTGTCAGGGTCATCTGGACTTACTGTGTGTGTCCTGCAAGGTCCCTCGGGGCAG
ACCCAGCAGTGCCAGCGCGGAGCCTAGGCGGCGTGCTTGTTGCAAGAGCACCAGGTTGAG
GGGGCATTCCCTGGTGGTCCCGTGGTTAGGATTCGGTGCCTTCACGGCCCAGGCTCAGTC
CCTGGTCTTGGGAACTGAGATCCTGCATCAAGCCTCTCCACACTGGAGGCAAAAACAAGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|27370020|ref|NP_766292.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|27370020|ref|NP_766292.1|

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               11-717, gnl|bosTau2|chr11 (34273232-34272527)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-717, gnl|bosTau2|chr11 (34273232-34272527)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               nlu (0.191681)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               med (0.116252)